Gene : Eucgr.J00825 E. grandis v2.0
Defline:  (1 of 10) 1.13.11.12 - Linoleate 13S-lipoxygenase / Lipoxidase Genomic Order:  723
Name:  ? Eucgr.J00825 Secondary Identifier:  ? PAC:32034236
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5409 Eucalyptus grandis pathologic  
Egrandis PWY-735 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00825 0.5kb upstream 0.5kb upstream 5772 true Chr10: 8809009-8814780 Eucalyptus grandis
Eucgr.J00825 0.5kb upstream 0.5kb upstream 500 false Chr10: 8809009-8809508 Eucalyptus grandis
Eucgr.J00825 0.5kb downstream 0.5kb downstream 5772 true Chr10: 8809509-8815280 Eucalyptus grandis
Eucgr.J00825 0.5kb downstream 0.5kb downstream 500 false Chr10: 8814781-8815280 Eucalyptus grandis
Eucgr.J00825 1.0kb upstream 1.0kb upstream 6272 true Chr10: 8808509-8814780 Eucalyptus grandis
Eucgr.J00825 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8808509-8809508 Eucalyptus grandis
Eucgr.J00825 1.0kb downstream 1.0kb downstream 6272 true Chr10: 8809509-8815780 Eucalyptus grandis
Eucgr.J00825 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8814781-8815780 Eucalyptus grandis
Eucgr.J00825 2.0kb upstream 2.0kb upstream 7272 true Chr10: 8807509-8814780 Eucalyptus grandis
Eucgr.J00825 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8807509-8809508 Eucalyptus grandis
Eucgr.J00825 2.0kb downstream 2.0kb downstream 7272 true Chr10: 8809509-8816780 Eucalyptus grandis
Eucgr.J00825 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8814781-8816780 Eucalyptus grandis
Eucgr.J00825 5.0kb upstream 5.0kb upstream 10272 true Chr10: 8804509-8814780 Eucalyptus grandis
Eucgr.J00825 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8804509-8809508 Eucalyptus grandis
Eucgr.J00825 5.0kb downstream 5.0kb downstream 10272 true Chr10: 8809509-8819780 Eucalyptus grandis
Eucgr.J00825 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8814781-8819780 Eucalyptus grandis
Eucgr.J00825 10.0kb upstream 10.0kb upstream 15272 true Chr10: 8799509-8814780 Eucalyptus grandis
Eucgr.J00825 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8799509-8809508 Eucalyptus grandis
Eucgr.J00825 10.0kb downstream 10.0kb downstream 15272 true Chr10: 8809509-8824780 Eucalyptus grandis
Eucgr.J00825 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8814781-8824780 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069762 5270 Rosid View MSA
123743667 5271 Pentapetalae View MSA
122789767 5272 Eudicot View MSA
122043119 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.491165 0.0 1.44635 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.67178 0.0 11.0277   High
cufflinks 0.345982 0.0 1.07045 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.022646 0.0 0.122993 Low Low

0 Strain