Gene : Eucgr.J00780 E. grandis v2.0
Defline:  (1 of 3) 1.17.1.4 - Xanthine dehydrogenase / Xanthine/NAD(+) oxidoreductase Genomic Order:  686
Name:  ? Eucgr.J00780 Secondary Identifier:  ? PAC:32035267
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5695 Eucalyptus grandis pathologic  
Egrandis PWY-6596 Eucalyptus grandis pathologic  
Egrandis PWY-6606 Eucalyptus grandis pathologic  
Egrandis PWY-6608 Eucalyptus grandis pathologic  
Egrandis SALVADEHYPOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00780 0.5kb upstream 0.5kb upstream 13445 true Chr10: 8239287-8252731 Eucalyptus grandis
Eucgr.J00780 0.5kb upstream 0.5kb upstream 500 false Chr10: 8239287-8239786 Eucalyptus grandis
Eucgr.J00780 0.5kb downstream 0.5kb downstream 13445 true Chr10: 8239787-8253231 Eucalyptus grandis
Eucgr.J00780 0.5kb downstream 0.5kb downstream 500 false Chr10: 8252732-8253231 Eucalyptus grandis
Eucgr.J00780 1.0kb upstream 1.0kb upstream 13945 true Chr10: 8238787-8252731 Eucalyptus grandis
Eucgr.J00780 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8238787-8239786 Eucalyptus grandis
Eucgr.J00780 1.0kb downstream 1.0kb downstream 13945 true Chr10: 8239787-8253731 Eucalyptus grandis
Eucgr.J00780 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8252732-8253731 Eucalyptus grandis
Eucgr.J00780 2.0kb upstream 2.0kb upstream 14945 true Chr10: 8237787-8252731 Eucalyptus grandis
Eucgr.J00780 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8237787-8239786 Eucalyptus grandis
Eucgr.J00780 2.0kb downstream 2.0kb downstream 14945 true Chr10: 8239787-8254731 Eucalyptus grandis
Eucgr.J00780 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8252732-8254731 Eucalyptus grandis
Eucgr.J00780 5.0kb upstream 5.0kb upstream 17945 true Chr10: 8234787-8252731 Eucalyptus grandis
Eucgr.J00780 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8234787-8239786 Eucalyptus grandis
Eucgr.J00780 5.0kb downstream 5.0kb downstream 17945 true Chr10: 8239787-8257731 Eucalyptus grandis
Eucgr.J00780 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8252732-8257731 Eucalyptus grandis
Eucgr.J00780 10.0kb upstream 10.0kb upstream 22945 true Chr10: 8229787-8252731 Eucalyptus grandis
Eucgr.J00780 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8229787-8239786 Eucalyptus grandis
Eucgr.J00780 10.0kb downstream 10.0kb downstream 22945 true Chr10: 8239787-8262731 Eucalyptus grandis
Eucgr.J00780 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8252732-8262731 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061487 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.48426 0.0 5.90468    
cufflinks 0.562971 0.0 1.63302 Low Low
cufflinks 3.16884 0.0 8.72579    
cufflinks 0.776291 0.0 2.18668    
cufflinks 0.759836 0.0 2.11975    
cufflinks 5.21118 0.0 12.2279   High

0 Strain