Gene : Eucgr.J00783 E. grandis v2.0
Defline:  (1 of 3) PTHR14155:SF75 - E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  689
Name:  ? Eucgr.J00783 Secondary Identifier:  ? PAC:32035546
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00783 0.5kb upstream 0.5kb upstream 4041 true Chr10: 8301324-8305364 Eucalyptus grandis
Eucgr.J00783 0.5kb upstream 0.5kb upstream 500 false Chr10: 8304865-8305364 Eucalyptus grandis
Eucgr.J00783 0.5kb downstream 0.5kb downstream 4041 true Chr10: 8300824-8304864 Eucalyptus grandis
Eucgr.J00783 0.5kb downstream 0.5kb downstream 500 false Chr10: 8300824-8301323 Eucalyptus grandis
Eucgr.J00783 1.0kb upstream 1.0kb upstream 4541 true Chr10: 8301324-8305864 Eucalyptus grandis
Eucgr.J00783 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8304865-8305864 Eucalyptus grandis
Eucgr.J00783 1.0kb downstream 1.0kb downstream 4541 true Chr10: 8300324-8304864 Eucalyptus grandis
Eucgr.J00783 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8300324-8301323 Eucalyptus grandis
Eucgr.J00783 2.0kb upstream 2.0kb upstream 5541 true Chr10: 8301324-8306864 Eucalyptus grandis
Eucgr.J00783 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8304865-8306864 Eucalyptus grandis
Eucgr.J00783 2.0kb downstream 2.0kb downstream 5541 true Chr10: 8299324-8304864 Eucalyptus grandis
Eucgr.J00783 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8299324-8301323 Eucalyptus grandis
Eucgr.J00783 5.0kb upstream 5.0kb upstream 8541 true Chr10: 8301324-8309864 Eucalyptus grandis
Eucgr.J00783 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8304865-8309864 Eucalyptus grandis
Eucgr.J00783 5.0kb downstream 5.0kb downstream 8541 true Chr10: 8296324-8304864 Eucalyptus grandis
Eucgr.J00783 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8296324-8301323 Eucalyptus grandis
Eucgr.J00783 10.0kb upstream 10.0kb upstream 13541 true Chr10: 8301324-8314864 Eucalyptus grandis
Eucgr.J00783 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8304865-8314864 Eucalyptus grandis
Eucgr.J00783 10.0kb downstream 10.0kb downstream 13541 true Chr10: 8291324-8304864 Eucalyptus grandis
Eucgr.J00783 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8291324-8301323 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4592 0.0 25.4582   High
cufflinks 3.50583 0.0 9.4296   Low
cufflinks 6.15038 0.0 15.7703    
cufflinks 3.8891 0.0 10.3857    
cufflinks 6.09696 0.0 15.6223    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain