Gene : Eucgr.J00786 E. grandis v2.0
Defline:  (1 of 6) PF00122//PF00403//PF12710 - E1-E2 ATPase (E1-E2_ATPase) // Heavy-metal-associated domain (HMA) // haloacid dehalogenase-like hydrolase (HAD) Genomic Order:  692
Name:  ? Eucgr.J00786 Secondary Identifier:  ? PAC:32033734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00786 0.5kb upstream 0.5kb upstream 8166 true Chr10: 8322454-8330619 Eucalyptus grandis
Eucgr.J00786 0.5kb upstream 0.5kb upstream 500 false Chr10: 8330120-8330619 Eucalyptus grandis
Eucgr.J00786 0.5kb downstream 0.5kb downstream 8166 true Chr10: 8321954-8330119 Eucalyptus grandis
Eucgr.J00786 0.5kb downstream 0.5kb downstream 500 false Chr10: 8321954-8322453 Eucalyptus grandis
Eucgr.J00786 1.0kb upstream 1.0kb upstream 8666 true Chr10: 8322454-8331119 Eucalyptus grandis
Eucgr.J00786 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8330120-8331119 Eucalyptus grandis
Eucgr.J00786 1.0kb downstream 1.0kb downstream 8666 true Chr10: 8321454-8330119 Eucalyptus grandis
Eucgr.J00786 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8321454-8322453 Eucalyptus grandis
Eucgr.J00786 2.0kb upstream 2.0kb upstream 9666 true Chr10: 8322454-8332119 Eucalyptus grandis
Eucgr.J00786 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8330120-8332119 Eucalyptus grandis
Eucgr.J00786 2.0kb downstream 2.0kb downstream 9666 true Chr10: 8320454-8330119 Eucalyptus grandis
Eucgr.J00786 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8320454-8322453 Eucalyptus grandis
Eucgr.J00786 5.0kb upstream 5.0kb upstream 12666 true Chr10: 8322454-8335119 Eucalyptus grandis
Eucgr.J00786 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8330120-8335119 Eucalyptus grandis
Eucgr.J00786 5.0kb downstream 5.0kb downstream 12666 true Chr10: 8317454-8330119 Eucalyptus grandis
Eucgr.J00786 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8317454-8322453 Eucalyptus grandis
Eucgr.J00786 10.0kb upstream 10.0kb upstream 17666 true Chr10: 8322454-8340119 Eucalyptus grandis
Eucgr.J00786 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8330120-8340119 Eucalyptus grandis
Eucgr.J00786 10.0kb downstream 10.0kb downstream 17666 true Chr10: 8312454-8330119 Eucalyptus grandis
Eucgr.J00786 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8312454-8322453 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069663 5270 Rosid View MSA
123747003 5271 Pentapetalae View MSA
122794490 5272 Eudicot View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.2193 0.0 50.4241    
cufflinks 16.4482 0.0 37.3218    
cufflinks 13.8905 0.0 31.2375    
cufflinks 27.6512 0.0 71.6082   High
cufflinks 19.7159 0.0 45.3181    
cufflinks 10.6598 0.0 23.9458   Low

0 Strain