Gene : Eucgr.J00733 E. grandis v2.0
Defline:  (1 of 2) PTHR24067//PTHR24067:SF121 - UBIQUITIN-CONJUGATING ENZYME E2 Genomic Order:  641
Name:  ? Eucgr.J00733 Secondary Identifier:  ? PAC:32032735
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J00733 0.5kb upstream 0.5kb upstream 2334 true Chr10: 7766296-7768629 Eucalyptus grandis
Eucgr.J00733 0.5kb upstream 0.5kb upstream 500 false Chr10: 7766296-7766795 Eucalyptus grandis
Eucgr.J00733 0.5kb downstream 0.5kb downstream 2334 true Chr10: 7766796-7769129 Eucalyptus grandis
Eucgr.J00733 0.5kb downstream 0.5kb downstream 500 false Chr10: 7768630-7769129 Eucalyptus grandis
Eucgr.J00733 1.0kb upstream 1.0kb upstream 2834 true Chr10: 7765796-7768629 Eucalyptus grandis
Eucgr.J00733 1.0kb upstream 1.0kb upstream 1000 false Chr10: 7765796-7766795 Eucalyptus grandis
Eucgr.J00733 1.0kb downstream 1.0kb downstream 2834 true Chr10: 7766796-7769629 Eucalyptus grandis
Eucgr.J00733 1.0kb downstream 1.0kb downstream 1000 false Chr10: 7768630-7769629 Eucalyptus grandis
Eucgr.J00733 2.0kb upstream 2.0kb upstream 3834 true Chr10: 7764796-7768629 Eucalyptus grandis
Eucgr.J00733 2.0kb upstream 2.0kb upstream 2000 false Chr10: 7764796-7766795 Eucalyptus grandis
Eucgr.J00733 2.0kb downstream 2.0kb downstream 3834 true Chr10: 7766796-7770629 Eucalyptus grandis
Eucgr.J00733 2.0kb downstream 2.0kb downstream 2000 false Chr10: 7768630-7770629 Eucalyptus grandis
Eucgr.J00733 5.0kb upstream 5.0kb upstream 6834 true Chr10: 7761796-7768629 Eucalyptus grandis
Eucgr.J00733 5.0kb upstream 5.0kb upstream 5000 false Chr10: 7761796-7766795 Eucalyptus grandis
Eucgr.J00733 5.0kb downstream 5.0kb downstream 6834 true Chr10: 7766796-7773629 Eucalyptus grandis
Eucgr.J00733 5.0kb downstream 5.0kb downstream 5000 false Chr10: 7768630-7773629 Eucalyptus grandis
Eucgr.J00733 10.0kb upstream 10.0kb upstream 11834 true Chr10: 7756796-7768629 Eucalyptus grandis
Eucgr.J00733 10.0kb upstream 10.0kb upstream 10000 false Chr10: 7756796-7766795 Eucalyptus grandis
Eucgr.J00733 10.0kb downstream 10.0kb downstream 11834 true Chr10: 7766796-7778629 Eucalyptus grandis
Eucgr.J00733 10.0kb downstream 10.0kb downstream 10000 false Chr10: 7768630-7778629 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064944 5270 Rosid View MSA
123741729 5271 Pentapetalae View MSA
122792532 5272 Eudicot View MSA
122046674 5273 Angiosperm View MSA
121349130 5274 Embryophyte View MSA
123424862 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6499 0.0 47.1381    
cufflinks 13.1422 0.0 31.1496    
cufflinks 14.5973 0.0 34.3731    
cufflinks 2.77854 0.0 7.70066   Low
cufflinks 16.907 0.0 39.1956    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain