Gene : Eucgr.J01412 E. grandis v2.0
Defline:  (1 of 1) PTHR11831:SF1 - U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3 Genomic Order:  1195
Name:  ? Eucgr.J01412 Secondary Identifier:  ? PAC:32033469
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01412 0.5kb upstream 0.5kb upstream 3165 true Chr10: 16850817-16853981 Eucalyptus grandis
Eucgr.J01412 0.5kb upstream 0.5kb upstream 500 false Chr10: 16853482-16853981 Eucalyptus grandis
Eucgr.J01412 0.5kb downstream 0.5kb downstream 3165 true Chr10: 16850317-16853481 Eucalyptus grandis
Eucgr.J01412 0.5kb downstream 0.5kb downstream 500 false Chr10: 16850317-16850816 Eucalyptus grandis
Eucgr.J01412 1.0kb upstream 1.0kb upstream 3665 true Chr10: 16850817-16854481 Eucalyptus grandis
Eucgr.J01412 1.0kb upstream 1.0kb upstream 1000 false Chr10: 16853482-16854481 Eucalyptus grandis
Eucgr.J01412 1.0kb downstream 1.0kb downstream 3665 true Chr10: 16849817-16853481 Eucalyptus grandis
Eucgr.J01412 1.0kb downstream 1.0kb downstream 1000 false Chr10: 16849817-16850816 Eucalyptus grandis
Eucgr.J01412 2.0kb upstream 2.0kb upstream 4665 true Chr10: 16850817-16855481 Eucalyptus grandis
Eucgr.J01412 2.0kb upstream 2.0kb upstream 2000 false Chr10: 16853482-16855481 Eucalyptus grandis
Eucgr.J01412 2.0kb downstream 2.0kb downstream 4665 true Chr10: 16848817-16853481 Eucalyptus grandis
Eucgr.J01412 2.0kb downstream 2.0kb downstream 2000 false Chr10: 16848817-16850816 Eucalyptus grandis
Eucgr.J01412 5.0kb upstream 5.0kb upstream 7665 true Chr10: 16850817-16858481 Eucalyptus grandis
Eucgr.J01412 5.0kb upstream 5.0kb upstream 5000 false Chr10: 16853482-16858481 Eucalyptus grandis
Eucgr.J01412 5.0kb downstream 5.0kb downstream 7665 true Chr10: 16845817-16853481 Eucalyptus grandis
Eucgr.J01412 5.0kb downstream 5.0kb downstream 5000 false Chr10: 16845817-16850816 Eucalyptus grandis
Eucgr.J01412 10.0kb upstream 10.0kb upstream 12665 true Chr10: 16850817-16863481 Eucalyptus grandis
Eucgr.J01412 10.0kb upstream 10.0kb upstream 10000 false Chr10: 16853482-16863481 Eucalyptus grandis
Eucgr.J01412 10.0kb downstream 10.0kb downstream 12665 true Chr10: 16840817-16853481 Eucalyptus grandis
Eucgr.J01412 10.0kb downstream 10.0kb downstream 10000 false Chr10: 16840817-16850816 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067940 5270 Rosid View MSA
123740372 5271 Pentapetalae View MSA
122792450 5272 Eudicot View MSA
122044096 5273 Angiosperm View MSA
121345167 5274 Embryophyte View MSA
123424004 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3759 0.0 27.483    
cufflinks 4.39455 0.0 11.6121    
cufflinks 7.14694 0.0 18.0531    
cufflinks 2.48329 0.0 6.94374   Low
cufflinks 8.87719 0.0 21.9521    
cufflinks 12.9918 0.0 31.1098   High

0 Strain