Gene : Eucgr.J01417 E. grandis v2.0
Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  1200
Name:  ? Eucgr.J01417 Secondary Identifier:  ? PAC:32035114
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6351 Eucalyptus grandis pathologic  
Egrandis PWY-6352 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01417 0.5kb upstream 0.5kb upstream 4671 true Chr10: 16897316-16901986 Eucalyptus grandis
Eucgr.J01417 0.5kb upstream 0.5kb upstream 500 false Chr10: 16897316-16897815 Eucalyptus grandis
Eucgr.J01417 0.5kb downstream 0.5kb downstream 4671 true Chr10: 16897816-16902486 Eucalyptus grandis
Eucgr.J01417 0.5kb downstream 0.5kb downstream 500 false Chr10: 16901987-16902486 Eucalyptus grandis
Eucgr.J01417 1.0kb upstream 1.0kb upstream 5171 true Chr10: 16896816-16901986 Eucalyptus grandis
Eucgr.J01417 1.0kb upstream 1.0kb upstream 1000 false Chr10: 16896816-16897815 Eucalyptus grandis
Eucgr.J01417 1.0kb downstream 1.0kb downstream 5171 true Chr10: 16897816-16902986 Eucalyptus grandis
Eucgr.J01417 1.0kb downstream 1.0kb downstream 1000 false Chr10: 16901987-16902986 Eucalyptus grandis
Eucgr.J01417 2.0kb upstream 2.0kb upstream 6171 true Chr10: 16895816-16901986 Eucalyptus grandis
Eucgr.J01417 2.0kb upstream 2.0kb upstream 2000 false Chr10: 16895816-16897815 Eucalyptus grandis
Eucgr.J01417 2.0kb downstream 2.0kb downstream 6171 true Chr10: 16897816-16903986 Eucalyptus grandis
Eucgr.J01417 2.0kb downstream 2.0kb downstream 2000 false Chr10: 16901987-16903986 Eucalyptus grandis
Eucgr.J01417 5.0kb upstream 5.0kb upstream 9171 true Chr10: 16892816-16901986 Eucalyptus grandis
Eucgr.J01417 5.0kb upstream 5.0kb upstream 5000 false Chr10: 16892816-16897815 Eucalyptus grandis
Eucgr.J01417 5.0kb downstream 5.0kb downstream 9171 true Chr10: 16897816-16906986 Eucalyptus grandis
Eucgr.J01417 5.0kb downstream 5.0kb downstream 5000 false Chr10: 16901987-16906986 Eucalyptus grandis
Eucgr.J01417 10.0kb upstream 10.0kb upstream 14171 true Chr10: 16887816-16901986 Eucalyptus grandis
Eucgr.J01417 10.0kb upstream 10.0kb upstream 10000 false Chr10: 16887816-16897815 Eucalyptus grandis
Eucgr.J01417 10.0kb downstream 10.0kb downstream 14171 true Chr10: 16897816-16911986 Eucalyptus grandis
Eucgr.J01417 10.0kb downstream 10.0kb downstream 10000 false Chr10: 16901987-16911986 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070086 5270 Rosid View MSA
123627897 5271 Pentapetalae View MSA
122662231 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.90199 0.0 11.4809   Low
cufflinks 34.7033 0.0 78.0163   High
cufflinks 6.72514 0.0 15.315    
cufflinks 17.8924 0.0 39.5753    
cufflinks 14.2456 0.0 31.5527    
cufflinks 5.35809 0.0 12.52    

0 Strain