Gene : Eucgr.J01371 E. grandis v2.0
Defline:  (1 of 1) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  1159
Name:  ? Eucgr.J01371 Secondary Identifier:  ? PAC:32032421
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY0-1264 Eucalyptus grandis pathologic  
Egrandis PWY-4381 Eucalyptus grandis pathologic  
Egrandis PWY-5156 Eucalyptus grandis pathologic  
Egrandis PWY-7388 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01371 0.5kb upstream 0.5kb upstream 4545 true Chr10: 15937380-15941924 Eucalyptus grandis
Eucgr.J01371 0.5kb upstream 0.5kb upstream 500 false Chr10: 15941425-15941924 Eucalyptus grandis
Eucgr.J01371 0.5kb downstream 0.5kb downstream 4545 true Chr10: 15936880-15941424 Eucalyptus grandis
Eucgr.J01371 0.5kb downstream 0.5kb downstream 500 false Chr10: 15936880-15937379 Eucalyptus grandis
Eucgr.J01371 1.0kb upstream 1.0kb upstream 5045 true Chr10: 15937380-15942424 Eucalyptus grandis
Eucgr.J01371 1.0kb upstream 1.0kb upstream 1000 false Chr10: 15941425-15942424 Eucalyptus grandis
Eucgr.J01371 1.0kb downstream 1.0kb downstream 5045 true Chr10: 15936380-15941424 Eucalyptus grandis
Eucgr.J01371 1.0kb downstream 1.0kb downstream 1000 false Chr10: 15936380-15937379 Eucalyptus grandis
Eucgr.J01371 2.0kb upstream 2.0kb upstream 6045 true Chr10: 15937380-15943424 Eucalyptus grandis
Eucgr.J01371 2.0kb upstream 2.0kb upstream 2000 false Chr10: 15941425-15943424 Eucalyptus grandis
Eucgr.J01371 2.0kb downstream 2.0kb downstream 6045 true Chr10: 15935380-15941424 Eucalyptus grandis
Eucgr.J01371 2.0kb downstream 2.0kb downstream 2000 false Chr10: 15935380-15937379 Eucalyptus grandis
Eucgr.J01371 5.0kb upstream 5.0kb upstream 9045 true Chr10: 15937380-15946424 Eucalyptus grandis
Eucgr.J01371 5.0kb upstream 5.0kb upstream 5000 false Chr10: 15941425-15946424 Eucalyptus grandis
Eucgr.J01371 5.0kb downstream 5.0kb downstream 9045 true Chr10: 15932380-15941424 Eucalyptus grandis
Eucgr.J01371 5.0kb downstream 5.0kb downstream 5000 false Chr10: 15932380-15937379 Eucalyptus grandis
Eucgr.J01371 10.0kb upstream 10.0kb upstream 14045 true Chr10: 15937380-15951424 Eucalyptus grandis
Eucgr.J01371 10.0kb upstream 10.0kb upstream 10000 false Chr10: 15941425-15951424 Eucalyptus grandis
Eucgr.J01371 10.0kb downstream 10.0kb downstream 14045 true Chr10: 15927380-15941424 Eucalyptus grandis
Eucgr.J01371 10.0kb downstream 10.0kb downstream 10000 false Chr10: 15927380-15937379 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.1602 0.0 25.8862    
cufflinks 0.46005 0.0 1.78891 Low Low
cufflinks 15.0179 0.0 35.5438    
cufflinks 2.06419 0.0 6.0378    
cufflinks 1.58426 0.0 4.84829    
cufflinks 15.3647 0.0 36.5656    

0 Strain