Gene : Eucgr.J01387 E. grandis v2.0
Defline:  (1 of 4) K18635 - protein SPIRAL1 and related proteins (SPR1) Genomic Order:  1173
Name:  ? Eucgr.J01387 Secondary Identifier:  ? PAC:32034736
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01387 0.5kb upstream 0.5kb upstream 3245 true Chr10: 16313668-16316912 Eucalyptus grandis
Eucgr.J01387 0.5kb upstream 0.5kb upstream 500 false Chr10: 16313668-16314167 Eucalyptus grandis
Eucgr.J01387 0.5kb downstream 0.5kb downstream 3245 true Chr10: 16314168-16317412 Eucalyptus grandis
Eucgr.J01387 0.5kb downstream 0.5kb downstream 500 false Chr10: 16316913-16317412 Eucalyptus grandis
Eucgr.J01387 1.0kb upstream 1.0kb upstream 3745 true Chr10: 16313168-16316912 Eucalyptus grandis
Eucgr.J01387 1.0kb upstream 1.0kb upstream 1000 false Chr10: 16313168-16314167 Eucalyptus grandis
Eucgr.J01387 1.0kb downstream 1.0kb downstream 3745 true Chr10: 16314168-16317912 Eucalyptus grandis
Eucgr.J01387 1.0kb downstream 1.0kb downstream 1000 false Chr10: 16316913-16317912 Eucalyptus grandis
Eucgr.J01387 2.0kb upstream 2.0kb upstream 4745 true Chr10: 16312168-16316912 Eucalyptus grandis
Eucgr.J01387 2.0kb upstream 2.0kb upstream 2000 false Chr10: 16312168-16314167 Eucalyptus grandis
Eucgr.J01387 2.0kb downstream 2.0kb downstream 4745 true Chr10: 16314168-16318912 Eucalyptus grandis
Eucgr.J01387 2.0kb downstream 2.0kb downstream 2000 false Chr10: 16316913-16318912 Eucalyptus grandis
Eucgr.J01387 5.0kb upstream 5.0kb upstream 7745 true Chr10: 16309168-16316912 Eucalyptus grandis
Eucgr.J01387 5.0kb upstream 5.0kb upstream 5000 false Chr10: 16309168-16314167 Eucalyptus grandis
Eucgr.J01387 5.0kb downstream 5.0kb downstream 7745 true Chr10: 16314168-16321912 Eucalyptus grandis
Eucgr.J01387 5.0kb downstream 5.0kb downstream 5000 false Chr10: 16316913-16321912 Eucalyptus grandis
Eucgr.J01387 10.0kb upstream 10.0kb upstream 12745 true Chr10: 16304168-16316912 Eucalyptus grandis
Eucgr.J01387 10.0kb upstream 10.0kb upstream 10000 false Chr10: 16304168-16314167 Eucalyptus grandis
Eucgr.J01387 10.0kb downstream 10.0kb downstream 12745 true Chr10: 16314168-16326912 Eucalyptus grandis
Eucgr.J01387 10.0kb downstream 10.0kb downstream 10000 false Chr10: 16316913-16326912 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.4185 0.0 192.056 High  
cufflinks 121.253 0.0 306.74 High  
cufflinks 55.0396 0.0 142.477 High Low
cufflinks 243.648 0.0 661.305 High High
cufflinks 205.572 0.0 467.262 High High
cufflinks 52.8596 0.0 146.068 High Low

0 Strain