Gene : Eucgr.J01252 E. grandis v2.0
Defline:  (1 of 1) PTHR12601:SF6 - CLUSTERED MITOCHONDRIA PROTEIN HOMOLOG Genomic Order:  1100
Name:  ? Eucgr.J01252 Secondary Identifier:  ? PAC:32034837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01252 0.5kb upstream 0.5kb upstream 15240 true Chr10: 13947467-13962706 Eucalyptus grandis
Eucgr.J01252 0.5kb upstream 0.5kb upstream 500 false Chr10: 13947467-13947966 Eucalyptus grandis
Eucgr.J01252 0.5kb downstream 0.5kb downstream 15240 true Chr10: 13947967-13963206 Eucalyptus grandis
Eucgr.J01252 0.5kb downstream 0.5kb downstream 500 false Chr10: 13962707-13963206 Eucalyptus grandis
Eucgr.J01252 1.0kb upstream 1.0kb upstream 15740 true Chr10: 13946967-13962706 Eucalyptus grandis
Eucgr.J01252 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13946967-13947966 Eucalyptus grandis
Eucgr.J01252 1.0kb downstream 1.0kb downstream 15740 true Chr10: 13947967-13963706 Eucalyptus grandis
Eucgr.J01252 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13962707-13963706 Eucalyptus grandis
Eucgr.J01252 2.0kb upstream 2.0kb upstream 16740 true Chr10: 13945967-13962706 Eucalyptus grandis
Eucgr.J01252 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13945967-13947966 Eucalyptus grandis
Eucgr.J01252 2.0kb downstream 2.0kb downstream 16740 true Chr10: 13947967-13964706 Eucalyptus grandis
Eucgr.J01252 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13962707-13964706 Eucalyptus grandis
Eucgr.J01252 5.0kb upstream 5.0kb upstream 19740 true Chr10: 13942967-13962706 Eucalyptus grandis
Eucgr.J01252 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13942967-13947966 Eucalyptus grandis
Eucgr.J01252 5.0kb downstream 5.0kb downstream 19740 true Chr10: 13947967-13967706 Eucalyptus grandis
Eucgr.J01252 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13962707-13967706 Eucalyptus grandis
Eucgr.J01252 10.0kb upstream 10.0kb upstream 24740 true Chr10: 13937967-13962706 Eucalyptus grandis
Eucgr.J01252 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13937967-13947966 Eucalyptus grandis
Eucgr.J01252 10.0kb downstream 10.0kb downstream 24740 true Chr10: 13947967-13972706 Eucalyptus grandis
Eucgr.J01252 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13962707-13972706 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065993 5270 Rosid View MSA
123739078 5271 Pentapetalae View MSA
122787261 5272 Eudicot View MSA
122046503 5273 Angiosperm View MSA
121349433 5274 Embryophyte View MSA
123381307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.5988 0.0 27.9245    
cufflinks 9.60089 0.0 21.235    
cufflinks 12.5028 0.0 27.7312    
cufflinks 9.46741 0.0 20.9417    
cufflinks 8.27441 0.0 18.304   Low
cufflinks 15.4411 0.0 34.3359   High

0 Strain