Gene : Eucgr.J01268 E. grandis v2.0
Defline:  (1 of 3) PTHR14155:SF75 - E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  1085
Name:  ? Eucgr.J01268 Secondary Identifier:  ? PAC:32032194
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01268 0.5kb upstream 0.5kb upstream 5001 true Chr10: 13817028-13822028 Eucalyptus grandis
Eucgr.J01268 0.5kb upstream 0.5kb upstream 500 false Chr10: 13821529-13822028 Eucalyptus grandis
Eucgr.J01268 0.5kb downstream 0.5kb downstream 5001 true Chr10: 13816528-13821528 Eucalyptus grandis
Eucgr.J01268 0.5kb downstream 0.5kb downstream 500 false Chr10: 13816528-13817027 Eucalyptus grandis
Eucgr.J01268 1.0kb upstream 1.0kb upstream 5501 true Chr10: 13817028-13822528 Eucalyptus grandis
Eucgr.J01268 1.0kb upstream 1.0kb upstream 1000 false Chr10: 13821529-13822528 Eucalyptus grandis
Eucgr.J01268 1.0kb downstream 1.0kb downstream 5501 true Chr10: 13816028-13821528 Eucalyptus grandis
Eucgr.J01268 1.0kb downstream 1.0kb downstream 1000 false Chr10: 13816028-13817027 Eucalyptus grandis
Eucgr.J01268 2.0kb upstream 2.0kb upstream 6501 true Chr10: 13817028-13823528 Eucalyptus grandis
Eucgr.J01268 2.0kb upstream 2.0kb upstream 2000 false Chr10: 13821529-13823528 Eucalyptus grandis
Eucgr.J01268 2.0kb downstream 2.0kb downstream 6501 true Chr10: 13815028-13821528 Eucalyptus grandis
Eucgr.J01268 2.0kb downstream 2.0kb downstream 2000 false Chr10: 13815028-13817027 Eucalyptus grandis
Eucgr.J01268 5.0kb upstream 5.0kb upstream 9501 true Chr10: 13817028-13826528 Eucalyptus grandis
Eucgr.J01268 5.0kb upstream 5.0kb upstream 5000 false Chr10: 13821529-13826528 Eucalyptus grandis
Eucgr.J01268 5.0kb downstream 5.0kb downstream 9501 true Chr10: 13812028-13821528 Eucalyptus grandis
Eucgr.J01268 5.0kb downstream 5.0kb downstream 5000 false Chr10: 13812028-13817027 Eucalyptus grandis
Eucgr.J01268 10.0kb upstream 10.0kb upstream 14501 true Chr10: 13817028-13831528 Eucalyptus grandis
Eucgr.J01268 10.0kb upstream 10.0kb upstream 10000 false Chr10: 13821529-13831528 Eucalyptus grandis
Eucgr.J01268 10.0kb downstream 10.0kb downstream 14501 true Chr10: 13807028-13821528 Eucalyptus grandis
Eucgr.J01268 10.0kb downstream 10.0kb downstream 10000 false Chr10: 13807028-13817027 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.74915 0.0 14.4408   High
cufflinks 0.937061 0.0 2.84428    
cufflinks 1.54502 0.0 4.41148    
cufflinks 5.55155 0.0 14.0033   High
cufflinks 0.654812 0.0 2.10592 Low Low

0 Strain