Gene : Eucgr.J01219 E. grandis v2.0
Defline:  (1 of 1) PTHR10091:SF10 - ALDOSE 1-EPIMERASE-RELATED Genomic Order:  1130
Name:  ? Eucgr.J01219 Secondary Identifier:  ? PAC:32033581
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY66-422 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01219 0.5kb upstream 0.5kb upstream 3531 true Chr10: 14703282-14706812 Eucalyptus grandis
Eucgr.J01219 0.5kb upstream 0.5kb upstream 500 false Chr10: 14703282-14703781 Eucalyptus grandis
Eucgr.J01219 0.5kb downstream 0.5kb downstream 3531 true Chr10: 14703782-14707312 Eucalyptus grandis
Eucgr.J01219 0.5kb downstream 0.5kb downstream 500 false Chr10: 14706813-14707312 Eucalyptus grandis
Eucgr.J01219 1.0kb upstream 1.0kb upstream 4031 true Chr10: 14702782-14706812 Eucalyptus grandis
Eucgr.J01219 1.0kb upstream 1.0kb upstream 1000 false Chr10: 14702782-14703781 Eucalyptus grandis
Eucgr.J01219 1.0kb downstream 1.0kb downstream 4031 true Chr10: 14703782-14707812 Eucalyptus grandis
Eucgr.J01219 1.0kb downstream 1.0kb downstream 1000 false Chr10: 14706813-14707812 Eucalyptus grandis
Eucgr.J01219 2.0kb upstream 2.0kb upstream 5031 true Chr10: 14701782-14706812 Eucalyptus grandis
Eucgr.J01219 2.0kb upstream 2.0kb upstream 2000 false Chr10: 14701782-14703781 Eucalyptus grandis
Eucgr.J01219 2.0kb downstream 2.0kb downstream 5031 true Chr10: 14703782-14708812 Eucalyptus grandis
Eucgr.J01219 2.0kb downstream 2.0kb downstream 2000 false Chr10: 14706813-14708812 Eucalyptus grandis
Eucgr.J01219 5.0kb upstream 5.0kb upstream 8031 true Chr10: 14698782-14706812 Eucalyptus grandis
Eucgr.J01219 5.0kb upstream 5.0kb upstream 5000 false Chr10: 14698782-14703781 Eucalyptus grandis
Eucgr.J01219 5.0kb downstream 5.0kb downstream 8031 true Chr10: 14703782-14711812 Eucalyptus grandis
Eucgr.J01219 5.0kb downstream 5.0kb downstream 5000 false Chr10: 14706813-14711812 Eucalyptus grandis
Eucgr.J01219 10.0kb upstream 10.0kb upstream 13031 true Chr10: 14693782-14706812 Eucalyptus grandis
Eucgr.J01219 10.0kb upstream 10.0kb upstream 10000 false Chr10: 14693782-14703781 Eucalyptus grandis
Eucgr.J01219 10.0kb downstream 10.0kb downstream 13031 true Chr10: 14703782-14716812 Eucalyptus grandis
Eucgr.J01219 10.0kb downstream 10.0kb downstream 10000 false Chr10: 14706813-14716812 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.18087 0.0 5.91714    
cufflinks 0.481125 0.0 1.54896 Low Low
cufflinks 4.30194 0.0 10.9447    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 40.7498 0.0 90.1327 High High

0 Strain