Gene : Eucgr.J01190 E. grandis v2.0
Defline:  (1 of 3) PTHR23180:SF249 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED Genomic Order:  1051
Name:  ? Eucgr.J01190 Secondary Identifier:  ? PAC:32034516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01190 0.5kb upstream 0.5kb upstream 5485 true Chr10: 12980856-12986340 Eucalyptus grandis
Eucgr.J01190 0.5kb upstream 0.5kb upstream 500 false Chr10: 12985841-12986340 Eucalyptus grandis
Eucgr.J01190 0.5kb downstream 0.5kb downstream 5485 true Chr10: 12980356-12985840 Eucalyptus grandis
Eucgr.J01190 0.5kb downstream 0.5kb downstream 500 false Chr10: 12980356-12980855 Eucalyptus grandis
Eucgr.J01190 1.0kb upstream 1.0kb upstream 5985 true Chr10: 12980856-12986840 Eucalyptus grandis
Eucgr.J01190 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12985841-12986840 Eucalyptus grandis
Eucgr.J01190 1.0kb downstream 1.0kb downstream 5985 true Chr10: 12979856-12985840 Eucalyptus grandis
Eucgr.J01190 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12979856-12980855 Eucalyptus grandis
Eucgr.J01190 2.0kb upstream 2.0kb upstream 6985 true Chr10: 12980856-12987840 Eucalyptus grandis
Eucgr.J01190 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12985841-12987840 Eucalyptus grandis
Eucgr.J01190 2.0kb downstream 2.0kb downstream 6985 true Chr10: 12978856-12985840 Eucalyptus grandis
Eucgr.J01190 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12978856-12980855 Eucalyptus grandis
Eucgr.J01190 5.0kb upstream 5.0kb upstream 9985 true Chr10: 12980856-12990840 Eucalyptus grandis
Eucgr.J01190 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12985841-12990840 Eucalyptus grandis
Eucgr.J01190 5.0kb downstream 5.0kb downstream 9985 true Chr10: 12975856-12985840 Eucalyptus grandis
Eucgr.J01190 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12975856-12980855 Eucalyptus grandis
Eucgr.J01190 10.0kb upstream 10.0kb upstream 14985 true Chr10: 12980856-12995840 Eucalyptus grandis
Eucgr.J01190 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12985841-12995840 Eucalyptus grandis
Eucgr.J01190 10.0kb downstream 10.0kb downstream 14985 true Chr10: 12970856-12985840 Eucalyptus grandis
Eucgr.J01190 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12970856-12980855 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063216 5270 Rosid View MSA
123748572 5271 Pentapetalae View MSA
122790257 5272 Eudicot View MSA
122045415 5273 Angiosperm View MSA
121349513 5274 Embryophyte View MSA
123381340 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.49492 0.0 9.10431    
cufflinks 6.24245 0.0 14.802    
cufflinks 4.16474 0.0 10.4516    
cufflinks 2.49271 0.0 6.83238   Low
cufflinks 3.97403 0.0 10.0594    
cufflinks 12.7494 0.0 30.3415   High

0 Strain