Gene : Eucgr.J01165 E. grandis v2.0
Defline:  (1 of 1) PTHR10644:SF1 - SPLICING FACTOR 3B SUBUNIT 3 Genomic Order:  1028
Name:  ? Eucgr.J01165 Secondary Identifier:  ? PAC:32032401
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01165 0.5kb upstream 0.5kb upstream 7279 true Chr10: 12754483-12761761 Eucalyptus grandis
Eucgr.J01165 0.5kb upstream 0.5kb upstream 500 false Chr10: 12761262-12761761 Eucalyptus grandis
Eucgr.J01165 0.5kb downstream 0.5kb downstream 7279 true Chr10: 12753983-12761261 Eucalyptus grandis
Eucgr.J01165 0.5kb downstream 0.5kb downstream 500 false Chr10: 12753983-12754482 Eucalyptus grandis
Eucgr.J01165 1.0kb upstream 1.0kb upstream 7779 true Chr10: 12754483-12762261 Eucalyptus grandis
Eucgr.J01165 1.0kb upstream 1.0kb upstream 1000 false Chr10: 12761262-12762261 Eucalyptus grandis
Eucgr.J01165 1.0kb downstream 1.0kb downstream 7779 true Chr10: 12753483-12761261 Eucalyptus grandis
Eucgr.J01165 1.0kb downstream 1.0kb downstream 1000 false Chr10: 12753483-12754482 Eucalyptus grandis
Eucgr.J01165 2.0kb upstream 2.0kb upstream 8779 true Chr10: 12754483-12763261 Eucalyptus grandis
Eucgr.J01165 2.0kb upstream 2.0kb upstream 2000 false Chr10: 12761262-12763261 Eucalyptus grandis
Eucgr.J01165 2.0kb downstream 2.0kb downstream 8779 true Chr10: 12752483-12761261 Eucalyptus grandis
Eucgr.J01165 2.0kb downstream 2.0kb downstream 2000 false Chr10: 12752483-12754482 Eucalyptus grandis
Eucgr.J01165 5.0kb upstream 5.0kb upstream 11779 true Chr10: 12754483-12766261 Eucalyptus grandis
Eucgr.J01165 5.0kb upstream 5.0kb upstream 5000 false Chr10: 12761262-12766261 Eucalyptus grandis
Eucgr.J01165 5.0kb downstream 5.0kb downstream 11779 true Chr10: 12749483-12761261 Eucalyptus grandis
Eucgr.J01165 5.0kb downstream 5.0kb downstream 5000 false Chr10: 12749483-12754482 Eucalyptus grandis
Eucgr.J01165 10.0kb upstream 10.0kb upstream 16779 true Chr10: 12754483-12771261 Eucalyptus grandis
Eucgr.J01165 10.0kb upstream 10.0kb upstream 10000 false Chr10: 12761262-12771261 Eucalyptus grandis
Eucgr.J01165 10.0kb downstream 10.0kb downstream 16779 true Chr10: 12744483-12761261 Eucalyptus grandis
Eucgr.J01165 10.0kb downstream 10.0kb downstream 10000 false Chr10: 12744483-12754482 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069298 5270 Rosid View MSA
123746995 5271 Pentapetalae View MSA
122794843 5272 Eudicot View MSA
122048690 5273 Angiosperm View MSA
121348178 5274 Embryophyte View MSA
123426142 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.5347 0.0 71.8302    
cufflinks 7.0835 0.0 17.2906   Low
cufflinks 21.0639 0.0 82.271    
cufflinks 13.026 0.0 33.568    
cufflinks 8.56075 0.0 21.239    
cufflinks 20.1302 0.0 53.5162    

0 Strain