Gene : Eucgr.J01067 E. grandis v2.0
Defline:  (1 of 1) PTHR10438:SF297 - THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC Genomic Order:  942
Name:  ? Eucgr.J01067 Secondary Identifier:  ? PAC:32033135
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis THIOREDOX-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01067 0.5kb upstream 0.5kb upstream 5027 true Chr10: 11694543-11699569 Eucalyptus grandis
Eucgr.J01067 0.5kb upstream 0.5kb upstream 500 false Chr10: 11694543-11695042 Eucalyptus grandis
Eucgr.J01067 0.5kb downstream 0.5kb downstream 5027 true Chr10: 11695043-11700069 Eucalyptus grandis
Eucgr.J01067 0.5kb downstream 0.5kb downstream 500 false Chr10: 11699570-11700069 Eucalyptus grandis
Eucgr.J01067 1.0kb upstream 1.0kb upstream 5527 true Chr10: 11694043-11699569 Eucalyptus grandis
Eucgr.J01067 1.0kb upstream 1.0kb upstream 1000 false Chr10: 11694043-11695042 Eucalyptus grandis
Eucgr.J01067 1.0kb downstream 1.0kb downstream 5527 true Chr10: 11695043-11700569 Eucalyptus grandis
Eucgr.J01067 1.0kb downstream 1.0kb downstream 1000 false Chr10: 11699570-11700569 Eucalyptus grandis
Eucgr.J01067 2.0kb upstream 2.0kb upstream 6527 true Chr10: 11693043-11699569 Eucalyptus grandis
Eucgr.J01067 2.0kb upstream 2.0kb upstream 2000 false Chr10: 11693043-11695042 Eucalyptus grandis
Eucgr.J01067 2.0kb downstream 2.0kb downstream 6527 true Chr10: 11695043-11701569 Eucalyptus grandis
Eucgr.J01067 2.0kb downstream 2.0kb downstream 2000 false Chr10: 11699570-11701569 Eucalyptus grandis
Eucgr.J01067 5.0kb upstream 5.0kb upstream 9527 true Chr10: 11690043-11699569 Eucalyptus grandis
Eucgr.J01067 5.0kb upstream 5.0kb upstream 5000 false Chr10: 11690043-11695042 Eucalyptus grandis
Eucgr.J01067 5.0kb downstream 5.0kb downstream 9527 true Chr10: 11695043-11704569 Eucalyptus grandis
Eucgr.J01067 5.0kb downstream 5.0kb downstream 5000 false Chr10: 11699570-11704569 Eucalyptus grandis
Eucgr.J01067 10.0kb upstream 10.0kb upstream 14527 true Chr10: 11685043-11699569 Eucalyptus grandis
Eucgr.J01067 10.0kb upstream 10.0kb upstream 10000 false Chr10: 11685043-11695042 Eucalyptus grandis
Eucgr.J01067 10.0kb downstream 10.0kb downstream 14527 true Chr10: 11695043-11709569 Eucalyptus grandis
Eucgr.J01067 10.0kb downstream 10.0kb downstream 10000 false Chr10: 11699570-11709569 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062487 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2537 0.0 29.5144   Low
cufflinks 33.7999 0.0 75.8728    
cufflinks 9.93314 0.0 23.5378   Low
cufflinks 40.96 0.0 100.055 High High
cufflinks 33.7632 0.0 83.3699    
cufflinks 18.514 0.0 43.5928    

0 Strain