Gene : Eucgr.J01915 E. grandis v2.0
Defline:  (1 of 2) PTHR10291:SF6 - DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE 1-RELATED Genomic Order:  1609
Name:  ? Eucgr.J01915 Secondary Identifier:  ? PAC:32032287
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01915 0.5kb upstream 0.5kb upstream 3433 true Chr10: 24540794-24544226 Eucalyptus grandis
Eucgr.J01915 0.5kb upstream 0.5kb upstream 500 false Chr10: 24540794-24541293 Eucalyptus grandis
Eucgr.J01915 0.5kb downstream 0.5kb downstream 3433 true Chr10: 24541294-24544726 Eucalyptus grandis
Eucgr.J01915 0.5kb downstream 0.5kb downstream 500 false Chr10: 24544227-24544726 Eucalyptus grandis
Eucgr.J01915 1.0kb upstream 1.0kb upstream 3933 true Chr10: 24540294-24544226 Eucalyptus grandis
Eucgr.J01915 1.0kb upstream 1.0kb upstream 1000 false Chr10: 24540294-24541293 Eucalyptus grandis
Eucgr.J01915 1.0kb downstream 1.0kb downstream 3933 true Chr10: 24541294-24545226 Eucalyptus grandis
Eucgr.J01915 1.0kb downstream 1.0kb downstream 1000 false Chr10: 24544227-24545226 Eucalyptus grandis
Eucgr.J01915 2.0kb upstream 2.0kb upstream 4933 true Chr10: 24539294-24544226 Eucalyptus grandis
Eucgr.J01915 2.0kb upstream 2.0kb upstream 2000 false Chr10: 24539294-24541293 Eucalyptus grandis
Eucgr.J01915 2.0kb downstream 2.0kb downstream 4933 true Chr10: 24541294-24546226 Eucalyptus grandis
Eucgr.J01915 2.0kb downstream 2.0kb downstream 2000 false Chr10: 24544227-24546226 Eucalyptus grandis
Eucgr.J01915 5.0kb upstream 5.0kb upstream 7933 true Chr10: 24536294-24544226 Eucalyptus grandis
Eucgr.J01915 5.0kb upstream 5.0kb upstream 5000 false Chr10: 24536294-24541293 Eucalyptus grandis
Eucgr.J01915 5.0kb downstream 5.0kb downstream 7933 true Chr10: 24541294-24549226 Eucalyptus grandis
Eucgr.J01915 5.0kb downstream 5.0kb downstream 5000 false Chr10: 24544227-24549226 Eucalyptus grandis
Eucgr.J01915 10.0kb upstream 10.0kb upstream 12933 true Chr10: 24531294-24544226 Eucalyptus grandis
Eucgr.J01915 10.0kb upstream 10.0kb upstream 10000 false Chr10: 24531294-24541293 Eucalyptus grandis
Eucgr.J01915 10.0kb downstream 10.0kb downstream 12933 true Chr10: 24541294-24554226 Eucalyptus grandis
Eucgr.J01915 10.0kb downstream 10.0kb downstream 10000 false Chr10: 24544227-24554226 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065300 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.21677 0.0 5.99203    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.17843 0.0 5.90162    
cufflinks 0.281656 0.0 0.967136 Low Low
cufflinks 0.985396 0.0 2.90695    
cufflinks 5.42567 0.0 13.3736   High

0 Strain