Gene : Eucgr.J01912 E. grandis v2.0
Defline:  (1 of 3) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) Genomic Order:  1606
Name:  ? Eucgr.J01912 Secondary Identifier:  ? PAC:32035094
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01912 0.5kb upstream 0.5kb upstream 10551 true Chr10: 24491951-24502501 Eucalyptus grandis
Eucgr.J01912 0.5kb upstream 0.5kb upstream 500 false Chr10: 24502002-24502501 Eucalyptus grandis
Eucgr.J01912 0.5kb downstream 0.5kb downstream 10551 true Chr10: 24491451-24502001 Eucalyptus grandis
Eucgr.J01912 0.5kb downstream 0.5kb downstream 500 false Chr10: 24491451-24491950 Eucalyptus grandis
Eucgr.J01912 1.0kb upstream 1.0kb upstream 11051 true Chr10: 24491951-24503001 Eucalyptus grandis
Eucgr.J01912 1.0kb upstream 1.0kb upstream 1000 false Chr10: 24502002-24503001 Eucalyptus grandis
Eucgr.J01912 1.0kb downstream 1.0kb downstream 11051 true Chr10: 24490951-24502001 Eucalyptus grandis
Eucgr.J01912 1.0kb downstream 1.0kb downstream 1000 false Chr10: 24490951-24491950 Eucalyptus grandis
Eucgr.J01912 2.0kb upstream 2.0kb upstream 12051 true Chr10: 24491951-24504001 Eucalyptus grandis
Eucgr.J01912 2.0kb upstream 2.0kb upstream 2000 false Chr10: 24502002-24504001 Eucalyptus grandis
Eucgr.J01912 2.0kb downstream 2.0kb downstream 12051 true Chr10: 24489951-24502001 Eucalyptus grandis
Eucgr.J01912 2.0kb downstream 2.0kb downstream 2000 false Chr10: 24489951-24491950 Eucalyptus grandis
Eucgr.J01912 5.0kb upstream 5.0kb upstream 15051 true Chr10: 24491951-24507001 Eucalyptus grandis
Eucgr.J01912 5.0kb upstream 5.0kb upstream 5000 false Chr10: 24502002-24507001 Eucalyptus grandis
Eucgr.J01912 5.0kb downstream 5.0kb downstream 15051 true Chr10: 24486951-24502001 Eucalyptus grandis
Eucgr.J01912 5.0kb downstream 5.0kb downstream 5000 false Chr10: 24486951-24491950 Eucalyptus grandis
Eucgr.J01912 10.0kb upstream 10.0kb upstream 20051 true Chr10: 24491951-24512001 Eucalyptus grandis
Eucgr.J01912 10.0kb upstream 10.0kb upstream 10000 false Chr10: 24502002-24512001 Eucalyptus grandis
Eucgr.J01912 10.0kb downstream 10.0kb downstream 20051 true Chr10: 24481951-24502001 Eucalyptus grandis
Eucgr.J01912 10.0kb downstream 10.0kb downstream 10000 false Chr10: 24481951-24491950 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073935 5270 Rosid View MSA
123747200 5271 Pentapetalae View MSA
122786859 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.8258 0.0 88.5479 High  
cufflinks 25.4662 0.0 56.3226   Low
cufflinks 42.4707 0.0 94.5971 High  
cufflinks 32.8748 0.0 72.8312    
cufflinks 37.9818 0.0 84.3468 High  
cufflinks 39.7653 0.0 88.4446 High  

0 Strain