Gene : Eucgr.J01887 E. grandis v2.0
Defline:  (1 of 11) 3.1.4.11 - Phosphoinositide phospholipase C / Triphosphoinositide phosphodiesterase Genomic Order:  1583
Name:  ? Eucgr.J01887 Secondary Identifier:  ? PAC:32034638
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPASYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-6351 Eucalyptus grandis pathologic  
Egrandis PWY-6367 Eucalyptus grandis pathologic  
Egrandis PWY-7039 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01887 0.5kb upstream 0.5kb upstream 3826 true Chr10: 24209738-24213563 Eucalyptus grandis
Eucgr.J01887 0.5kb upstream 0.5kb upstream 500 false Chr10: 24209738-24210237 Eucalyptus grandis
Eucgr.J01887 0.5kb downstream 0.5kb downstream 3826 true Chr10: 24210238-24214063 Eucalyptus grandis
Eucgr.J01887 0.5kb downstream 0.5kb downstream 500 false Chr10: 24213564-24214063 Eucalyptus grandis
Eucgr.J01887 1.0kb upstream 1.0kb upstream 4326 true Chr10: 24209238-24213563 Eucalyptus grandis
Eucgr.J01887 1.0kb upstream 1.0kb upstream 1000 false Chr10: 24209238-24210237 Eucalyptus grandis
Eucgr.J01887 1.0kb downstream 1.0kb downstream 4326 true Chr10: 24210238-24214563 Eucalyptus grandis
Eucgr.J01887 1.0kb downstream 1.0kb downstream 1000 false Chr10: 24213564-24214563 Eucalyptus grandis
Eucgr.J01887 2.0kb upstream 2.0kb upstream 5326 true Chr10: 24208238-24213563 Eucalyptus grandis
Eucgr.J01887 2.0kb upstream 2.0kb upstream 2000 false Chr10: 24208238-24210237 Eucalyptus grandis
Eucgr.J01887 2.0kb downstream 2.0kb downstream 5326 true Chr10: 24210238-24215563 Eucalyptus grandis
Eucgr.J01887 2.0kb downstream 2.0kb downstream 2000 false Chr10: 24213564-24215563 Eucalyptus grandis
Eucgr.J01887 5.0kb upstream 5.0kb upstream 8326 true Chr10: 24205238-24213563 Eucalyptus grandis
Eucgr.J01887 5.0kb upstream 5.0kb upstream 5000 false Chr10: 24205238-24210237 Eucalyptus grandis
Eucgr.J01887 5.0kb downstream 5.0kb downstream 8326 true Chr10: 24210238-24218563 Eucalyptus grandis
Eucgr.J01887 5.0kb downstream 5.0kb downstream 5000 false Chr10: 24213564-24218563 Eucalyptus grandis
Eucgr.J01887 10.0kb upstream 10.0kb upstream 13326 true Chr10: 24200238-24213563 Eucalyptus grandis
Eucgr.J01887 10.0kb upstream 10.0kb upstream 10000 false Chr10: 24200238-24210237 Eucalyptus grandis
Eucgr.J01887 10.0kb downstream 10.0kb downstream 13326 true Chr10: 24210238-24223563 Eucalyptus grandis
Eucgr.J01887 10.0kb downstream 10.0kb downstream 10000 false Chr10: 24213564-24223563 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792751 5273 Angiosperm View MSA
124071681 5270 Rosid View MSA
123628037 5271 Pentapetalae View MSA
122798488 5272 Eudicot View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0788 0.0 3.05195    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.500465 0.0 1.54249   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.01926 0.0 5.35388    
cufflinks 1.847 0.0 4.96393    

0 Strain