Gene : Eucgr.J01853 E. grandis v2.0
Defline:  (1 of 10) PF13516 - Leucine Rich repeat (LRR_6) Genomic Order:  1558
Name:  ? Eucgr.J01853 Secondary Identifier:  ? PAC:32032543
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01853 0.5kb upstream 0.5kb upstream 5154 true Chr10: 23840490-23845643 Eucalyptus grandis
Eucgr.J01853 0.5kb upstream 0.5kb upstream 500 false Chr10: 23840490-23840989 Eucalyptus grandis
Eucgr.J01853 0.5kb downstream 0.5kb downstream 5154 true Chr10: 23840990-23846143 Eucalyptus grandis
Eucgr.J01853 0.5kb downstream 0.5kb downstream 500 false Chr10: 23845644-23846143 Eucalyptus grandis
Eucgr.J01853 1.0kb upstream 1.0kb upstream 5654 true Chr10: 23839990-23845643 Eucalyptus grandis
Eucgr.J01853 1.0kb upstream 1.0kb upstream 1000 false Chr10: 23839990-23840989 Eucalyptus grandis
Eucgr.J01853 1.0kb downstream 1.0kb downstream 5654 true Chr10: 23840990-23846643 Eucalyptus grandis
Eucgr.J01853 1.0kb downstream 1.0kb downstream 1000 false Chr10: 23845644-23846643 Eucalyptus grandis
Eucgr.J01853 2.0kb upstream 2.0kb upstream 6654 true Chr10: 23838990-23845643 Eucalyptus grandis
Eucgr.J01853 2.0kb upstream 2.0kb upstream 2000 false Chr10: 23838990-23840989 Eucalyptus grandis
Eucgr.J01853 2.0kb downstream 2.0kb downstream 6654 true Chr10: 23840990-23847643 Eucalyptus grandis
Eucgr.J01853 2.0kb downstream 2.0kb downstream 2000 false Chr10: 23845644-23847643 Eucalyptus grandis
Eucgr.J01853 5.0kb upstream 5.0kb upstream 9654 true Chr10: 23835990-23845643 Eucalyptus grandis
Eucgr.J01853 5.0kb upstream 5.0kb upstream 5000 false Chr10: 23835990-23840989 Eucalyptus grandis
Eucgr.J01853 5.0kb downstream 5.0kb downstream 9654 true Chr10: 23840990-23850643 Eucalyptus grandis
Eucgr.J01853 5.0kb downstream 5.0kb downstream 5000 false Chr10: 23845644-23850643 Eucalyptus grandis
Eucgr.J01853 10.0kb upstream 10.0kb upstream 14654 true Chr10: 23830990-23845643 Eucalyptus grandis
Eucgr.J01853 10.0kb upstream 10.0kb upstream 10000 false Chr10: 23830990-23840989 Eucalyptus grandis
Eucgr.J01853 10.0kb downstream 10.0kb downstream 14654 true Chr10: 23840990-23855643 Eucalyptus grandis
Eucgr.J01853 10.0kb downstream 10.0kb downstream 10000 false Chr10: 23845644-23855643 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071815 5270 Rosid View MSA
123740566 5271 Pentapetalae View MSA
122791928 5272 Eudicot View MSA
122041670 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121346747 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.478 0.0 27.9455    
cufflinks 19.7664 0.0 50.4081   High
cufflinks 6.34359 0.0 16.3055   Low
cufflinks 9.61655 0.0 28.4827    
cufflinks 6.34674 0.0 16.0073   Low
cufflinks 15.1915 0.0 36.5403    

0 Strain