Gene : Eucgr.J01861 E. grandis v2.0
Defline:  (1 of 1) PTHR12320:SF7 - PROTEIN PHOSPHATASE 2C 26-RELATED Genomic Order:  1564
Name:  ? Eucgr.J01861 Secondary Identifier:  ? PAC:32033939
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01861 0.5kb upstream 0.5kb upstream 4413 true Chr10: 23934677-23939089 Eucalyptus grandis
Eucgr.J01861 0.5kb upstream 0.5kb upstream 500 false Chr10: 23934677-23935176 Eucalyptus grandis
Eucgr.J01861 0.5kb downstream 0.5kb downstream 4413 true Chr10: 23935177-23939589 Eucalyptus grandis
Eucgr.J01861 0.5kb downstream 0.5kb downstream 500 false Chr10: 23939090-23939589 Eucalyptus grandis
Eucgr.J01861 1.0kb upstream 1.0kb upstream 4913 true Chr10: 23934177-23939089 Eucalyptus grandis
Eucgr.J01861 1.0kb upstream 1.0kb upstream 1000 false Chr10: 23934177-23935176 Eucalyptus grandis
Eucgr.J01861 1.0kb downstream 1.0kb downstream 4913 true Chr10: 23935177-23940089 Eucalyptus grandis
Eucgr.J01861 1.0kb downstream 1.0kb downstream 1000 false Chr10: 23939090-23940089 Eucalyptus grandis
Eucgr.J01861 2.0kb upstream 2.0kb upstream 5913 true Chr10: 23933177-23939089 Eucalyptus grandis
Eucgr.J01861 2.0kb upstream 2.0kb upstream 2000 false Chr10: 23933177-23935176 Eucalyptus grandis
Eucgr.J01861 2.0kb downstream 2.0kb downstream 5913 true Chr10: 23935177-23941089 Eucalyptus grandis
Eucgr.J01861 2.0kb downstream 2.0kb downstream 2000 false Chr10: 23939090-23941089 Eucalyptus grandis
Eucgr.J01861 5.0kb upstream 5.0kb upstream 8913 true Chr10: 23930177-23939089 Eucalyptus grandis
Eucgr.J01861 5.0kb upstream 5.0kb upstream 5000 false Chr10: 23930177-23935176 Eucalyptus grandis
Eucgr.J01861 5.0kb downstream 5.0kb downstream 8913 true Chr10: 23935177-23944089 Eucalyptus grandis
Eucgr.J01861 5.0kb downstream 5.0kb downstream 5000 false Chr10: 23939090-23944089 Eucalyptus grandis
Eucgr.J01861 10.0kb upstream 10.0kb upstream 13913 true Chr10: 23925177-23939089 Eucalyptus grandis
Eucgr.J01861 10.0kb upstream 10.0kb upstream 10000 false Chr10: 23925177-23935176 Eucalyptus grandis
Eucgr.J01861 10.0kb downstream 10.0kb downstream 13913 true Chr10: 23935177-23949089 Eucalyptus grandis
Eucgr.J01861 10.0kb downstream 10.0kb downstream 10000 false Chr10: 23939090-23949089 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067424 5270 Rosid View MSA
123737907 5271 Pentapetalae View MSA
122786654 5272 Eudicot View MSA
122044601 5273 Angiosperm View MSA
121346475 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.63083 0.0 13.8118    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.50844 0.0 10.4565    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.09727 0.0 5.7407   Low
cufflinks 5.69138 0.0 23.2727   High

0 Strain