Gene : Eucgr.J01819 E. grandis v2.0
Defline:  (1 of 3) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1526
Name:  ? Eucgr.J01819 Secondary Identifier:  ? PAC:32034470
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01819 0.5kb upstream 0.5kb upstream 3000 true Chr10: 23462256-23465255 Eucalyptus grandis
Eucgr.J01819 0.5kb upstream 0.5kb upstream 500 false Chr10: 23462256-23462755 Eucalyptus grandis
Eucgr.J01819 0.5kb downstream 0.5kb downstream 3000 true Chr10: 23462756-23465755 Eucalyptus grandis
Eucgr.J01819 0.5kb downstream 0.5kb downstream 500 false Chr10: 23465256-23465755 Eucalyptus grandis
Eucgr.J01819 1.0kb upstream 1.0kb upstream 3500 true Chr10: 23461756-23465255 Eucalyptus grandis
Eucgr.J01819 1.0kb upstream 1.0kb upstream 1000 false Chr10: 23461756-23462755 Eucalyptus grandis
Eucgr.J01819 1.0kb downstream 1.0kb downstream 3500 true Chr10: 23462756-23466255 Eucalyptus grandis
Eucgr.J01819 1.0kb downstream 1.0kb downstream 1000 false Chr10: 23465256-23466255 Eucalyptus grandis
Eucgr.J01819 2.0kb upstream 2.0kb upstream 4500 true Chr10: 23460756-23465255 Eucalyptus grandis
Eucgr.J01819 2.0kb upstream 2.0kb upstream 2000 false Chr10: 23460756-23462755 Eucalyptus grandis
Eucgr.J01819 2.0kb downstream 2.0kb downstream 4500 true Chr10: 23462756-23467255 Eucalyptus grandis
Eucgr.J01819 2.0kb downstream 2.0kb downstream 2000 false Chr10: 23465256-23467255 Eucalyptus grandis
Eucgr.J01819 5.0kb upstream 5.0kb upstream 7500 true Chr10: 23457756-23465255 Eucalyptus grandis
Eucgr.J01819 5.0kb upstream 5.0kb upstream 5000 false Chr10: 23457756-23462755 Eucalyptus grandis
Eucgr.J01819 5.0kb downstream 5.0kb downstream 7500 true Chr10: 23462756-23470255 Eucalyptus grandis
Eucgr.J01819 5.0kb downstream 5.0kb downstream 5000 false Chr10: 23465256-23470255 Eucalyptus grandis
Eucgr.J01819 10.0kb upstream 10.0kb upstream 12500 true Chr10: 23452756-23465255 Eucalyptus grandis
Eucgr.J01819 10.0kb upstream 10.0kb upstream 10000 false Chr10: 23452756-23462755 Eucalyptus grandis
Eucgr.J01819 10.0kb downstream 10.0kb downstream 12500 true Chr10: 23462756-23475255 Eucalyptus grandis
Eucgr.J01819 10.0kb downstream 10.0kb downstream 10000 false Chr10: 23465256-23475255 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062345 5270 Rosid View MSA
123742026 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.0237 0.0 5.3295    
cufflinks 1.89082 0.0 4.99625    
cufflinks 5.03326 0.0 12.0821    
cufflinks 2.41652 0.0 6.23161    
cufflinks 6.06506 0.0 14.3392   High
cufflinks 0.702973 0.0 2.0784 Low Low

0 Strain