Gene : Eucgr.J01820 E. grandis v2.0
Defline:  (1 of 5) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase Genomic Order:  1527
Name:  ? Eucgr.J01820 Secondary Identifier:  ? PAC:32034628
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-5098 Eucalyptus grandis pathologic  
Egrandis PWY-6927 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01820 0.5kb upstream 0.5kb upstream 2859 true Chr10: 23468777-23471635 Eucalyptus grandis
Eucgr.J01820 0.5kb upstream 0.5kb upstream 500 false Chr10: 23468777-23469276 Eucalyptus grandis
Eucgr.J01820 0.5kb downstream 0.5kb downstream 2859 true Chr10: 23469277-23472135 Eucalyptus grandis
Eucgr.J01820 0.5kb downstream 0.5kb downstream 500 false Chr10: 23471636-23472135 Eucalyptus grandis
Eucgr.J01820 1.0kb upstream 1.0kb upstream 3359 true Chr10: 23468277-23471635 Eucalyptus grandis
Eucgr.J01820 1.0kb upstream 1.0kb upstream 1000 false Chr10: 23468277-23469276 Eucalyptus grandis
Eucgr.J01820 1.0kb downstream 1.0kb downstream 3359 true Chr10: 23469277-23472635 Eucalyptus grandis
Eucgr.J01820 1.0kb downstream 1.0kb downstream 1000 false Chr10: 23471636-23472635 Eucalyptus grandis
Eucgr.J01820 2.0kb upstream 2.0kb upstream 4359 true Chr10: 23467277-23471635 Eucalyptus grandis
Eucgr.J01820 2.0kb upstream 2.0kb upstream 2000 false Chr10: 23467277-23469276 Eucalyptus grandis
Eucgr.J01820 2.0kb downstream 2.0kb downstream 4359 true Chr10: 23469277-23473635 Eucalyptus grandis
Eucgr.J01820 2.0kb downstream 2.0kb downstream 2000 false Chr10: 23471636-23473635 Eucalyptus grandis
Eucgr.J01820 5.0kb upstream 5.0kb upstream 7359 true Chr10: 23464277-23471635 Eucalyptus grandis
Eucgr.J01820 5.0kb upstream 5.0kb upstream 5000 false Chr10: 23464277-23469276 Eucalyptus grandis
Eucgr.J01820 5.0kb downstream 5.0kb downstream 7359 true Chr10: 23469277-23476635 Eucalyptus grandis
Eucgr.J01820 5.0kb downstream 5.0kb downstream 5000 false Chr10: 23471636-23476635 Eucalyptus grandis
Eucgr.J01820 10.0kb upstream 10.0kb upstream 12359 true Chr10: 23459277-23471635 Eucalyptus grandis
Eucgr.J01820 10.0kb upstream 10.0kb upstream 10000 false Chr10: 23459277-23469276 Eucalyptus grandis
Eucgr.J01820 10.0kb downstream 10.0kb downstream 12359 true Chr10: 23469277-23481635 Eucalyptus grandis
Eucgr.J01820 10.0kb downstream 10.0kb downstream 10000 false Chr10: 23471636-23481635 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027752 5273 Angiosperm View MSA
124051201 5270 Rosid View MSA
123753634 5271 Pentapetalae View MSA
122797124 5272 Eudicot View MSA
123429167 5275 Viridiplantae View MSA
121348668 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain