Gene : Eucgr.J01749 E. grandis v2.0
Defline:  (1 of 3) PTHR11817:SF5 - PYRUVATE KINASE-RELATED Genomic Order:  1468
Name:  ? Eucgr.J01749 Secondary Identifier:  ? PAC:32033033
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis ANAEROFRUCAT-PWY Eucalyptus grandis pathologic  
Egrandis ANAGLYCOLYSIS-PWY Eucalyptus grandis pathologic  
Egrandis PWY-1042 Eucalyptus grandis pathologic  
Egrandis PWY-5464 Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01749 0.5kb upstream 0.5kb upstream 4300 true Chr10: 22050663-22054962 Eucalyptus grandis
Eucgr.J01749 0.5kb upstream 0.5kb upstream 500 false Chr10: 22054463-22054962 Eucalyptus grandis
Eucgr.J01749 0.5kb downstream 0.5kb downstream 4300 true Chr10: 22050163-22054462 Eucalyptus grandis
Eucgr.J01749 0.5kb downstream 0.5kb downstream 500 false Chr10: 22050163-22050662 Eucalyptus grandis
Eucgr.J01749 1.0kb upstream 1.0kb upstream 4800 true Chr10: 22050663-22055462 Eucalyptus grandis
Eucgr.J01749 1.0kb upstream 1.0kb upstream 1000 false Chr10: 22054463-22055462 Eucalyptus grandis
Eucgr.J01749 1.0kb downstream 1.0kb downstream 4800 true Chr10: 22049663-22054462 Eucalyptus grandis
Eucgr.J01749 1.0kb downstream 1.0kb downstream 1000 false Chr10: 22049663-22050662 Eucalyptus grandis
Eucgr.J01749 2.0kb upstream 2.0kb upstream 5800 true Chr10: 22050663-22056462 Eucalyptus grandis
Eucgr.J01749 2.0kb upstream 2.0kb upstream 2000 false Chr10: 22054463-22056462 Eucalyptus grandis
Eucgr.J01749 2.0kb downstream 2.0kb downstream 5800 true Chr10: 22048663-22054462 Eucalyptus grandis
Eucgr.J01749 2.0kb downstream 2.0kb downstream 2000 false Chr10: 22048663-22050662 Eucalyptus grandis
Eucgr.J01749 5.0kb upstream 5.0kb upstream 8800 true Chr10: 22050663-22059462 Eucalyptus grandis
Eucgr.J01749 5.0kb upstream 5.0kb upstream 5000 false Chr10: 22054463-22059462 Eucalyptus grandis
Eucgr.J01749 5.0kb downstream 5.0kb downstream 8800 true Chr10: 22045663-22054462 Eucalyptus grandis
Eucgr.J01749 5.0kb downstream 5.0kb downstream 5000 false Chr10: 22045663-22050662 Eucalyptus grandis
Eucgr.J01749 10.0kb upstream 10.0kb upstream 13800 true Chr10: 22050663-22064462 Eucalyptus grandis
Eucgr.J01749 10.0kb upstream 10.0kb upstream 10000 false Chr10: 22054463-22064462 Eucalyptus grandis
Eucgr.J01749 10.0kb downstream 10.0kb downstream 13800 true Chr10: 22040663-22054462 Eucalyptus grandis
Eucgr.J01749 10.0kb downstream 10.0kb downstream 10000 false Chr10: 22040663-22050662 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068384 5270 Rosid View MSA
123737970 5271 Pentapetalae View MSA
122792873 5272 Eudicot View MSA
122044181 5273 Angiosperm View MSA
121310247 5274 Embryophyte View MSA
123427047 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.1588 0.0 89.9037 High  
cufflinks 36.0076 0.0 82.7605   Low
cufflinks 41.5445 0.0 96.3775 High  
cufflinks 43.1939 0.0 100.461 High  
cufflinks 35.6852 0.0 81.7792   Low
cufflinks 44.1652 0.0 102.677 High High

0 Strain