Gene : Eucgr.J01676 E. grandis v2.0
Defline:  (1 of 3) PF07786 - Protein of unknown function (DUF1624) (DUF1624) Genomic Order:  1415
Name:  ? Eucgr.J01676 Secondary Identifier:  ? PAC:32033967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01676 0.5kb upstream 0.5kb upstream 6590 true Chr10: 21002682-21009271 Eucalyptus grandis
Eucgr.J01676 0.5kb upstream 0.5kb upstream 500 false Chr10: 21008772-21009271 Eucalyptus grandis
Eucgr.J01676 0.5kb downstream 0.5kb downstream 6590 true Chr10: 21002182-21008771 Eucalyptus grandis
Eucgr.J01676 0.5kb downstream 0.5kb downstream 500 false Chr10: 21002182-21002681 Eucalyptus grandis
Eucgr.J01676 1.0kb upstream 1.0kb upstream 7090 true Chr10: 21002682-21009771 Eucalyptus grandis
Eucgr.J01676 1.0kb upstream 1.0kb upstream 1000 false Chr10: 21008772-21009771 Eucalyptus grandis
Eucgr.J01676 1.0kb downstream 1.0kb downstream 7090 true Chr10: 21001682-21008771 Eucalyptus grandis
Eucgr.J01676 1.0kb downstream 1.0kb downstream 1000 false Chr10: 21001682-21002681 Eucalyptus grandis
Eucgr.J01676 2.0kb upstream 2.0kb upstream 8090 true Chr10: 21002682-21010771 Eucalyptus grandis
Eucgr.J01676 2.0kb upstream 2.0kb upstream 2000 false Chr10: 21008772-21010771 Eucalyptus grandis
Eucgr.J01676 2.0kb downstream 2.0kb downstream 8090 true Chr10: 21000682-21008771 Eucalyptus grandis
Eucgr.J01676 2.0kb downstream 2.0kb downstream 2000 false Chr10: 21000682-21002681 Eucalyptus grandis
Eucgr.J01676 5.0kb upstream 5.0kb upstream 11090 true Chr10: 21002682-21013771 Eucalyptus grandis
Eucgr.J01676 5.0kb upstream 5.0kb upstream 5000 false Chr10: 21008772-21013771 Eucalyptus grandis
Eucgr.J01676 5.0kb downstream 5.0kb downstream 11090 true Chr10: 20997682-21008771 Eucalyptus grandis
Eucgr.J01676 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20997682-21002681 Eucalyptus grandis
Eucgr.J01676 10.0kb upstream 10.0kb upstream 16090 true Chr10: 21002682-21018771 Eucalyptus grandis
Eucgr.J01676 10.0kb upstream 10.0kb upstream 10000 false Chr10: 21008772-21018771 Eucalyptus grandis
Eucgr.J01676 10.0kb downstream 10.0kb downstream 16090 true Chr10: 20992682-21008771 Eucalyptus grandis
Eucgr.J01676 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20992682-21002681 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071338 5270 Rosid View MSA
123742332 5271 Pentapetalae View MSA
122794345 5272 Eudicot View MSA
122048388 5273 Angiosperm View MSA
121350425 5274 Embryophyte View MSA
123424378 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.71321 0.0 2.49381   Low
cufflinks 5.28344 0.0 12.9388   High
cufflinks 1.08982 0.0 3.57905    
cufflinks 1.38561 0.0 4.1515    
cufflinks 4.2741 0.0 13.2899   High
cufflinks 0.885287 0.0 3.05915    

0 Strain