Gene : Eucgr.J01641 E. grandis v2.0
Defline:  (1 of 1) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  1385
Name:  ? Eucgr.J01641 Secondary Identifier:  ? PAC:32034637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01641 0.5kb upstream 0.5kb upstream 7801 true Chr10: 20615886-20623686 Eucalyptus grandis
Eucgr.J01641 0.5kb upstream 0.5kb upstream 500 false Chr10: 20623187-20623686 Eucalyptus grandis
Eucgr.J01641 0.5kb downstream 0.5kb downstream 7801 true Chr10: 20615386-20623186 Eucalyptus grandis
Eucgr.J01641 0.5kb downstream 0.5kb downstream 500 false Chr10: 20615386-20615885 Eucalyptus grandis
Eucgr.J01641 1.0kb upstream 1.0kb upstream 8301 true Chr10: 20615886-20624186 Eucalyptus grandis
Eucgr.J01641 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20623187-20624186 Eucalyptus grandis
Eucgr.J01641 1.0kb downstream 1.0kb downstream 8301 true Chr10: 20614886-20623186 Eucalyptus grandis
Eucgr.J01641 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20614886-20615885 Eucalyptus grandis
Eucgr.J01641 2.0kb upstream 2.0kb upstream 9301 true Chr10: 20615886-20625186 Eucalyptus grandis
Eucgr.J01641 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20623187-20625186 Eucalyptus grandis
Eucgr.J01641 2.0kb downstream 2.0kb downstream 9301 true Chr10: 20613886-20623186 Eucalyptus grandis
Eucgr.J01641 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20613886-20615885 Eucalyptus grandis
Eucgr.J01641 5.0kb upstream 5.0kb upstream 12301 true Chr10: 20615886-20628186 Eucalyptus grandis
Eucgr.J01641 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20623187-20628186 Eucalyptus grandis
Eucgr.J01641 5.0kb downstream 5.0kb downstream 12301 true Chr10: 20610886-20623186 Eucalyptus grandis
Eucgr.J01641 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20610886-20615885 Eucalyptus grandis
Eucgr.J01641 10.0kb upstream 10.0kb upstream 17301 true Chr10: 20615886-20633186 Eucalyptus grandis
Eucgr.J01641 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20623187-20633186 Eucalyptus grandis
Eucgr.J01641 10.0kb downstream 10.0kb downstream 17301 true Chr10: 20605886-20623186 Eucalyptus grandis
Eucgr.J01641 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20605886-20615885 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066677 5270 Rosid View MSA
123746319 5271 Pentapetalae View MSA
122787337 5272 Eudicot View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.4856 0.0 22.2467    
cufflinks 39.6035 0.0 87.6522   High
cufflinks 10.2598 0.0 23.8426    
cufflinks 30.5357 0.0 67.5444   High
cufflinks 7.42686 0.0 17.7509   Low
cufflinks 13.5078 0.0 30.8744    

0 Strain