Gene : Eucgr.J01621 E. grandis v2.0
Defline:  (1 of 2) PTHR11615:SF115 - NADH-UBIQUINONE OXIDOREDUCTASE 75 KDA SUBUNIT, MITOCHONDRIAL Genomic Order:  1368
Name:  ? Eucgr.J01621 Secondary Identifier:  ? PAC:32033754
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-3781 Eucalyptus grandis pathologic  
Egrandis PWY-4302 Eucalyptus grandis pathologic  
Egrandis PWY-5083 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01621 0.5kb upstream 0.5kb upstream 7993 true Chr10: 20367927-20375919 Eucalyptus grandis
Eucgr.J01621 0.5kb upstream 0.5kb upstream 500 false Chr10: 20375420-20375919 Eucalyptus grandis
Eucgr.J01621 0.5kb downstream 0.5kb downstream 7993 true Chr10: 20367427-20375419 Eucalyptus grandis
Eucgr.J01621 0.5kb downstream 0.5kb downstream 500 false Chr10: 20367427-20367926 Eucalyptus grandis
Eucgr.J01621 1.0kb upstream 1.0kb upstream 8493 true Chr10: 20367927-20376419 Eucalyptus grandis
Eucgr.J01621 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20375420-20376419 Eucalyptus grandis
Eucgr.J01621 1.0kb downstream 1.0kb downstream 8493 true Chr10: 20366927-20375419 Eucalyptus grandis
Eucgr.J01621 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20366927-20367926 Eucalyptus grandis
Eucgr.J01621 2.0kb upstream 2.0kb upstream 9493 true Chr10: 20367927-20377419 Eucalyptus grandis
Eucgr.J01621 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20375420-20377419 Eucalyptus grandis
Eucgr.J01621 2.0kb downstream 2.0kb downstream 9493 true Chr10: 20365927-20375419 Eucalyptus grandis
Eucgr.J01621 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20365927-20367926 Eucalyptus grandis
Eucgr.J01621 5.0kb upstream 5.0kb upstream 12493 true Chr10: 20367927-20380419 Eucalyptus grandis
Eucgr.J01621 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20375420-20380419 Eucalyptus grandis
Eucgr.J01621 5.0kb downstream 5.0kb downstream 12493 true Chr10: 20362927-20375419 Eucalyptus grandis
Eucgr.J01621 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20362927-20367926 Eucalyptus grandis
Eucgr.J01621 10.0kb upstream 10.0kb upstream 17493 true Chr10: 20367927-20385419 Eucalyptus grandis
Eucgr.J01621 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20375420-20385419 Eucalyptus grandis
Eucgr.J01621 10.0kb downstream 10.0kb downstream 17493 true Chr10: 20357927-20375419 Eucalyptus grandis
Eucgr.J01621 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20357927-20367926 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062856 5270 Rosid View MSA
123737847 5271 Pentapetalae View MSA
122786481 5272 Eudicot View MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.9416 0.0 69.0739 High High
cufflinks 22.6297 0.0 50.1612    
cufflinks 25.8246 0.0 57.3751 High  
cufflinks 30.7971 0.0 68.8544   High
cufflinks 21.1134 0.0 46.7411   Low
cufflinks 27.697 0.0 61.6068    

0 Strain