Gene : Eucgr.J01598 E. grandis v2.0
Defline:  (1 of 2) PTHR31448:SF3 - IFA-BINDING PROTEIN Genomic Order:  1347
Name:  ? Eucgr.J01598 Secondary Identifier:  ? PAC:32034172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01598 0.5kb upstream 0.5kb upstream 4015 true Chr10: 20111758-20115772 Eucalyptus grandis
Eucgr.J01598 0.5kb upstream 0.5kb upstream 500 false Chr10: 20111758-20112257 Eucalyptus grandis
Eucgr.J01598 0.5kb downstream 0.5kb downstream 4015 true Chr10: 20112258-20116272 Eucalyptus grandis
Eucgr.J01598 0.5kb downstream 0.5kb downstream 500 false Chr10: 20115773-20116272 Eucalyptus grandis
Eucgr.J01598 1.0kb upstream 1.0kb upstream 4515 true Chr10: 20111258-20115772 Eucalyptus grandis
Eucgr.J01598 1.0kb upstream 1.0kb upstream 1000 false Chr10: 20111258-20112257 Eucalyptus grandis
Eucgr.J01598 1.0kb downstream 1.0kb downstream 4515 true Chr10: 20112258-20116772 Eucalyptus grandis
Eucgr.J01598 1.0kb downstream 1.0kb downstream 1000 false Chr10: 20115773-20116772 Eucalyptus grandis
Eucgr.J01598 2.0kb upstream 2.0kb upstream 5515 true Chr10: 20110258-20115772 Eucalyptus grandis
Eucgr.J01598 2.0kb upstream 2.0kb upstream 2000 false Chr10: 20110258-20112257 Eucalyptus grandis
Eucgr.J01598 2.0kb downstream 2.0kb downstream 5515 true Chr10: 20112258-20117772 Eucalyptus grandis
Eucgr.J01598 2.0kb downstream 2.0kb downstream 2000 false Chr10: 20115773-20117772 Eucalyptus grandis
Eucgr.J01598 5.0kb upstream 5.0kb upstream 8515 true Chr10: 20107258-20115772 Eucalyptus grandis
Eucgr.J01598 5.0kb upstream 5.0kb upstream 5000 false Chr10: 20107258-20112257 Eucalyptus grandis
Eucgr.J01598 5.0kb downstream 5.0kb downstream 8515 true Chr10: 20112258-20120772 Eucalyptus grandis
Eucgr.J01598 5.0kb downstream 5.0kb downstream 5000 false Chr10: 20115773-20120772 Eucalyptus grandis
Eucgr.J01598 10.0kb upstream 10.0kb upstream 13515 true Chr10: 20102258-20115772 Eucalyptus grandis
Eucgr.J01598 10.0kb upstream 10.0kb upstream 10000 false Chr10: 20102258-20112257 Eucalyptus grandis
Eucgr.J01598 10.0kb downstream 10.0kb downstream 13515 true Chr10: 20112258-20125772 Eucalyptus grandis
Eucgr.J01598 10.0kb downstream 10.0kb downstream 10000 false Chr10: 20115773-20125772 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070207 5270 Rosid View MSA
123753700 5271 Pentapetalae View MSA
122788125 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.844057 0.0 2.27457   Low
cufflinks 2.80004 0.0 6.67179    
cufflinks 0.925207 0.0 2.46053   Low
cufflinks 2.56272 0.0 6.13976    
cufflinks 3.42077 0.0 8.01286   High
cufflinks 1.62559 0.0 4.12395    

0 Strain