Gene : Eucgr.J01570 E. grandis v2.0
Defline:  (1 of 8) 2.7.7.69 - GDP-L-galactose phosphorylase. Genomic Order:  1327
Name:  ? Eucgr.J01570 Secondary Identifier:  ? PAC:32033673
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-882 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01570 0.5kb upstream 0.5kb upstream 3639 true Chr10: 19537505-19541143 Eucalyptus grandis
Eucgr.J01570 0.5kb upstream 0.5kb upstream 500 false Chr10: 19540644-19541143 Eucalyptus grandis
Eucgr.J01570 0.5kb downstream 0.5kb downstream 3639 true Chr10: 19537005-19540643 Eucalyptus grandis
Eucgr.J01570 0.5kb downstream 0.5kb downstream 500 false Chr10: 19537005-19537504 Eucalyptus grandis
Eucgr.J01570 1.0kb upstream 1.0kb upstream 4139 true Chr10: 19537505-19541643 Eucalyptus grandis
Eucgr.J01570 1.0kb upstream 1.0kb upstream 1000 false Chr10: 19540644-19541643 Eucalyptus grandis
Eucgr.J01570 1.0kb downstream 1.0kb downstream 4139 true Chr10: 19536505-19540643 Eucalyptus grandis
Eucgr.J01570 1.0kb downstream 1.0kb downstream 1000 false Chr10: 19536505-19537504 Eucalyptus grandis
Eucgr.J01570 2.0kb upstream 2.0kb upstream 5139 true Chr10: 19537505-19542643 Eucalyptus grandis
Eucgr.J01570 2.0kb upstream 2.0kb upstream 2000 false Chr10: 19540644-19542643 Eucalyptus grandis
Eucgr.J01570 2.0kb downstream 2.0kb downstream 5139 true Chr10: 19535505-19540643 Eucalyptus grandis
Eucgr.J01570 2.0kb downstream 2.0kb downstream 2000 false Chr10: 19535505-19537504 Eucalyptus grandis
Eucgr.J01570 5.0kb upstream 5.0kb upstream 8139 true Chr10: 19537505-19545643 Eucalyptus grandis
Eucgr.J01570 5.0kb upstream 5.0kb upstream 5000 false Chr10: 19540644-19545643 Eucalyptus grandis
Eucgr.J01570 5.0kb downstream 5.0kb downstream 8139 true Chr10: 19532505-19540643 Eucalyptus grandis
Eucgr.J01570 5.0kb downstream 5.0kb downstream 5000 false Chr10: 19532505-19537504 Eucalyptus grandis
Eucgr.J01570 10.0kb upstream 10.0kb upstream 13139 true Chr10: 19537505-19550643 Eucalyptus grandis
Eucgr.J01570 10.0kb upstream 10.0kb upstream 10000 false Chr10: 19540644-19550643 Eucalyptus grandis
Eucgr.J01570 10.0kb downstream 10.0kb downstream 13139 true Chr10: 19527505-19540643 Eucalyptus grandis
Eucgr.J01570 10.0kb downstream 10.0kb downstream 10000 false Chr10: 19527505-19537504 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071871 5270 Rosid View MSA
123751256 5271 Pentapetalae View MSA
122793442 5272 Eudicot View MSA
122044489 5273 Angiosperm View MSA
121349330 5274 Embryophyte View MSA
123424251 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.199481 0.0 0.723822 Low  
cufflinks 0.226192 0.0 0.801008 Low  
cufflinks 0.504651 0.0 1.61495    
cufflinks 0.00248126 0.0 0.0505818 Low Low
cufflinks 0.341409 0.0 1.14645 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain