Gene : Eucgr.J01579 E. grandis v2.0
Defline:  (1 of 5) KOG2720 - Predicted hydrolase (HIT family) Genomic Order:  1334
Name:  ? Eucgr.J01579 Secondary Identifier:  ? PAC:32032324
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-882 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J01579 0.5kb upstream 0.5kb upstream 6442 true Chr10: 19785173-19791614 Eucalyptus grandis
Eucgr.J01579 0.5kb upstream 0.5kb upstream 500 false Chr10: 19791115-19791614 Eucalyptus grandis
Eucgr.J01579 0.5kb downstream 0.5kb downstream 6442 true Chr10: 19784673-19791114 Eucalyptus grandis
Eucgr.J01579 0.5kb downstream 0.5kb downstream 500 false Chr10: 19784673-19785172 Eucalyptus grandis
Eucgr.J01579 1.0kb upstream 1.0kb upstream 6942 true Chr10: 19785173-19792114 Eucalyptus grandis
Eucgr.J01579 1.0kb upstream 1.0kb upstream 1000 false Chr10: 19791115-19792114 Eucalyptus grandis
Eucgr.J01579 1.0kb downstream 1.0kb downstream 6942 true Chr10: 19784173-19791114 Eucalyptus grandis
Eucgr.J01579 1.0kb downstream 1.0kb downstream 1000 false Chr10: 19784173-19785172 Eucalyptus grandis
Eucgr.J01579 2.0kb upstream 2.0kb upstream 7942 true Chr10: 19785173-19793114 Eucalyptus grandis
Eucgr.J01579 2.0kb upstream 2.0kb upstream 2000 false Chr10: 19791115-19793114 Eucalyptus grandis
Eucgr.J01579 2.0kb downstream 2.0kb downstream 7942 true Chr10: 19783173-19791114 Eucalyptus grandis
Eucgr.J01579 2.0kb downstream 2.0kb downstream 2000 false Chr10: 19783173-19785172 Eucalyptus grandis
Eucgr.J01579 5.0kb upstream 5.0kb upstream 10942 true Chr10: 19785173-19796114 Eucalyptus grandis
Eucgr.J01579 5.0kb upstream 5.0kb upstream 5000 false Chr10: 19791115-19796114 Eucalyptus grandis
Eucgr.J01579 5.0kb downstream 5.0kb downstream 10942 true Chr10: 19780173-19791114 Eucalyptus grandis
Eucgr.J01579 5.0kb downstream 5.0kb downstream 5000 false Chr10: 19780173-19785172 Eucalyptus grandis
Eucgr.J01579 10.0kb upstream 10.0kb upstream 15942 true Chr10: 19785173-19801114 Eucalyptus grandis
Eucgr.J01579 10.0kb upstream 10.0kb upstream 10000 false Chr10: 19791115-19801114 Eucalyptus grandis
Eucgr.J01579 10.0kb downstream 10.0kb downstream 15942 true Chr10: 19775173-19791114 Eucalyptus grandis
Eucgr.J01579 10.0kb downstream 10.0kb downstream 10000 false Chr10: 19775173-19785172 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071871 5270 Rosid View MSA
123751256 5271 Pentapetalae View MSA
122793442 5272 Eudicot View MSA
122044489 5273 Angiosperm View MSA
121349330 5274 Embryophyte View MSA
123424251 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.346904 0.0 1.221 Low Low
cufflinks 4.08187 0.0 10.7124   High
cufflinks 0.954527 0.0 2.94101    
cufflinks 0.688845 0.0 2.20183    
cufflinks 1.30839 0.0 3.86586    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain