Gene : Eucgr.J02318 E. grandis v2.0
Defline:  (1 of 6) PTHR10891//PTHR10891:SF621 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  1966
Name:  ? Eucgr.J02318 Secondary Identifier:  ? PAC:32034147
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02318 0.5kb upstream 0.5kb upstream 1234 true Chr10: 28376223-28377456 Eucalyptus grandis
Eucgr.J02318 0.5kb upstream 0.5kb upstream 500 false Chr10: 28376223-28376722 Eucalyptus grandis
Eucgr.J02318 0.5kb downstream 0.5kb downstream 1234 true Chr10: 28376723-28377956 Eucalyptus grandis
Eucgr.J02318 0.5kb downstream 0.5kb downstream 500 false Chr10: 28377457-28377956 Eucalyptus grandis
Eucgr.J02318 1.0kb upstream 1.0kb upstream 1734 true Chr10: 28375723-28377456 Eucalyptus grandis
Eucgr.J02318 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28375723-28376722 Eucalyptus grandis
Eucgr.J02318 1.0kb downstream 1.0kb downstream 1734 true Chr10: 28376723-28378456 Eucalyptus grandis
Eucgr.J02318 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28377457-28378456 Eucalyptus grandis
Eucgr.J02318 2.0kb upstream 2.0kb upstream 2734 true Chr10: 28374723-28377456 Eucalyptus grandis
Eucgr.J02318 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28374723-28376722 Eucalyptus grandis
Eucgr.J02318 2.0kb downstream 2.0kb downstream 2734 true Chr10: 28376723-28379456 Eucalyptus grandis
Eucgr.J02318 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28377457-28379456 Eucalyptus grandis
Eucgr.J02318 5.0kb upstream 5.0kb upstream 5734 true Chr10: 28371723-28377456 Eucalyptus grandis
Eucgr.J02318 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28371723-28376722 Eucalyptus grandis
Eucgr.J02318 5.0kb downstream 5.0kb downstream 5734 true Chr10: 28376723-28382456 Eucalyptus grandis
Eucgr.J02318 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28377457-28382456 Eucalyptus grandis
Eucgr.J02318 10.0kb upstream 10.0kb upstream 10734 true Chr10: 28366723-28377456 Eucalyptus grandis
Eucgr.J02318 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28366723-28376722 Eucalyptus grandis
Eucgr.J02318 10.0kb downstream 10.0kb downstream 10734 true Chr10: 28376723-28387456 Eucalyptus grandis
Eucgr.J02318 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28377457-28387456 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.72495 0.0 5.22416   Low
cufflinks 9.3039 0.0 23.9052    
cufflinks 3.36528 0.0 9.56926    
cufflinks 3.65936 0.0 10.3336    
cufflinks 11.8695 0.0 29.7291   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain