Gene : Eucgr.J02331 E. grandis v2.0
Defline:  (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY Genomic Order:  1976
Name:  ? Eucgr.J02331 Secondary Identifier:  ? PAC:32033383
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02331 0.5kb upstream 0.5kb upstream 5066 true Chr10: 28490580-28495645 Eucalyptus grandis
Eucgr.J02331 0.5kb upstream 0.5kb upstream 500 false Chr10: 28490580-28491079 Eucalyptus grandis
Eucgr.J02331 0.5kb downstream 0.5kb downstream 5066 true Chr10: 28491080-28496145 Eucalyptus grandis
Eucgr.J02331 0.5kb downstream 0.5kb downstream 500 false Chr10: 28495646-28496145 Eucalyptus grandis
Eucgr.J02331 1.0kb upstream 1.0kb upstream 5566 true Chr10: 28490080-28495645 Eucalyptus grandis
Eucgr.J02331 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28490080-28491079 Eucalyptus grandis
Eucgr.J02331 1.0kb downstream 1.0kb downstream 5566 true Chr10: 28491080-28496645 Eucalyptus grandis
Eucgr.J02331 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28495646-28496645 Eucalyptus grandis
Eucgr.J02331 2.0kb upstream 2.0kb upstream 6566 true Chr10: 28489080-28495645 Eucalyptus grandis
Eucgr.J02331 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28489080-28491079 Eucalyptus grandis
Eucgr.J02331 2.0kb downstream 2.0kb downstream 6566 true Chr10: 28491080-28497645 Eucalyptus grandis
Eucgr.J02331 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28495646-28497645 Eucalyptus grandis
Eucgr.J02331 5.0kb upstream 5.0kb upstream 9566 true Chr10: 28486080-28495645 Eucalyptus grandis
Eucgr.J02331 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28486080-28491079 Eucalyptus grandis
Eucgr.J02331 5.0kb downstream 5.0kb downstream 9566 true Chr10: 28491080-28500645 Eucalyptus grandis
Eucgr.J02331 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28495646-28500645 Eucalyptus grandis
Eucgr.J02331 10.0kb upstream 10.0kb upstream 14566 true Chr10: 28481080-28495645 Eucalyptus grandis
Eucgr.J02331 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28481080-28491079 Eucalyptus grandis
Eucgr.J02331 10.0kb downstream 10.0kb downstream 14566 true Chr10: 28491080-28505645 Eucalyptus grandis
Eucgr.J02331 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28495646-28505645 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063737 5270 Rosid View MSA
123738222 5271 Pentapetalae View MSA
122796833 5272 Eudicot View MSA
122044630 5273 Angiosperm View MSA
121346457 5274 Embryophyte View MSA
123428846 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.72568 0.0 7.37745    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.5179 0.0 4.4188    
cufflinks 0.740922 0.0 2.43806   Low
cufflinks 1.92331 0.0 5.41444    
cufflinks 10.7478 0.0 25.9057   High

0 Strain