Gene : Eucgr.J02308 E. grandis v2.0
Defline:  (1 of 1) PTHR21148:SF1 - PHOSDUCIN-LIKE PROTEIN 3 Genomic Order:  1959
Name:  ? Eucgr.J02308 Secondary Identifier:  ? PAC:32032128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02308 0.5kb upstream 0.5kb upstream 2850 true Chr10: 28308443-28311292 Eucalyptus grandis
Eucgr.J02308 0.5kb upstream 0.5kb upstream 500 false Chr10: 28308443-28308942 Eucalyptus grandis
Eucgr.J02308 0.5kb downstream 0.5kb downstream 2850 true Chr10: 28308943-28311792 Eucalyptus grandis
Eucgr.J02308 0.5kb downstream 0.5kb downstream 500 false Chr10: 28311293-28311792 Eucalyptus grandis
Eucgr.J02308 1.0kb upstream 1.0kb upstream 3350 true Chr10: 28307943-28311292 Eucalyptus grandis
Eucgr.J02308 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28307943-28308942 Eucalyptus grandis
Eucgr.J02308 1.0kb downstream 1.0kb downstream 3350 true Chr10: 28308943-28312292 Eucalyptus grandis
Eucgr.J02308 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28311293-28312292 Eucalyptus grandis
Eucgr.J02308 2.0kb upstream 2.0kb upstream 4350 true Chr10: 28306943-28311292 Eucalyptus grandis
Eucgr.J02308 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28306943-28308942 Eucalyptus grandis
Eucgr.J02308 2.0kb downstream 2.0kb downstream 4350 true Chr10: 28308943-28313292 Eucalyptus grandis
Eucgr.J02308 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28311293-28313292 Eucalyptus grandis
Eucgr.J02308 5.0kb upstream 5.0kb upstream 7350 true Chr10: 28303943-28311292 Eucalyptus grandis
Eucgr.J02308 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28303943-28308942 Eucalyptus grandis
Eucgr.J02308 5.0kb downstream 5.0kb downstream 7350 true Chr10: 28308943-28316292 Eucalyptus grandis
Eucgr.J02308 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28311293-28316292 Eucalyptus grandis
Eucgr.J02308 10.0kb upstream 10.0kb upstream 12350 true Chr10: 28298943-28311292 Eucalyptus grandis
Eucgr.J02308 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28298943-28308942 Eucalyptus grandis
Eucgr.J02308 10.0kb downstream 10.0kb downstream 12350 true Chr10: 28308943-28321292 Eucalyptus grandis
Eucgr.J02308 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28311293-28321292 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063753 5270 Rosid View MSA
123741848 5271 Pentapetalae View MSA
122790335 5272 Eudicot View MSA
122042488 5273 Angiosperm View MSA
121344718 5274 Embryophyte View MSA
123424986 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.385 0.0 54.2534   Low
cufflinks 44.9815 0.0 101.058 High  
cufflinks 30.8826 0.0 81.2511 High  
cufflinks 50.3475 0.0 113.395 High High
cufflinks 48.0824 0.0 108.118 High  
cufflinks 25.8461 0.0 59.3197    

0 Strain