Gene : Eucgr.J02310 E. grandis v2.0
Defline:  (1 of 1) PTHR12585:SF31 - SISTER CHROMATID COHESION 1 PROTEIN 2 Genomic Order:  1961
Name:  ? Eucgr.J02310 Secondary Identifier:  ? PAC:32033858
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02310 0.5kb upstream 0.5kb upstream 5585 true Chr10: 28316910-28322494 Eucalyptus grandis
Eucgr.J02310 0.5kb upstream 0.5kb upstream 500 false Chr10: 28321995-28322494 Eucalyptus grandis
Eucgr.J02310 0.5kb downstream 0.5kb downstream 5585 true Chr10: 28316410-28321994 Eucalyptus grandis
Eucgr.J02310 0.5kb downstream 0.5kb downstream 500 false Chr10: 28316410-28316909 Eucalyptus grandis
Eucgr.J02310 1.0kb upstream 1.0kb upstream 6085 true Chr10: 28316910-28322994 Eucalyptus grandis
Eucgr.J02310 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28321995-28322994 Eucalyptus grandis
Eucgr.J02310 1.0kb downstream 1.0kb downstream 6085 true Chr10: 28315910-28321994 Eucalyptus grandis
Eucgr.J02310 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28315910-28316909 Eucalyptus grandis
Eucgr.J02310 2.0kb upstream 2.0kb upstream 7085 true Chr10: 28316910-28323994 Eucalyptus grandis
Eucgr.J02310 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28321995-28323994 Eucalyptus grandis
Eucgr.J02310 2.0kb downstream 2.0kb downstream 7085 true Chr10: 28314910-28321994 Eucalyptus grandis
Eucgr.J02310 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28314910-28316909 Eucalyptus grandis
Eucgr.J02310 5.0kb upstream 5.0kb upstream 10085 true Chr10: 28316910-28326994 Eucalyptus grandis
Eucgr.J02310 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28321995-28326994 Eucalyptus grandis
Eucgr.J02310 5.0kb downstream 5.0kb downstream 10085 true Chr10: 28311910-28321994 Eucalyptus grandis
Eucgr.J02310 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28311910-28316909 Eucalyptus grandis
Eucgr.J02310 10.0kb upstream 10.0kb upstream 15085 true Chr10: 28316910-28331994 Eucalyptus grandis
Eucgr.J02310 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28321995-28331994 Eucalyptus grandis
Eucgr.J02310 10.0kb downstream 10.0kb downstream 15085 true Chr10: 28306910-28321994 Eucalyptus grandis
Eucgr.J02310 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28306910-28316909 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124043814 5270 Rosid Singleton cluster - no MSA
123746964 5271 Pentapetalae View MSA
122794410 5272 Eudicot View MSA
122048297 5273 Angiosperm View MSA
121349590 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13306 0.0 5.95592   High
cufflinks 0.401776 0.0 1.49114 Low  
cufflinks 1.9756 0.0 6.48346   High
cufflinks 0.126392 0.0 0.650606 Low Low
cufflinks 0.230301 0.0 0.87271 Low  
cufflinks 0.363616 0.0 1.3518 Low  

0 Strain