Gene : Eucgr.J02311 E. grandis v2.0
Defline:  (1 of 1) PTHR13068:SF9 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  1962
Name:  ? Eucgr.J02311 Secondary Identifier:  ? PAC:32033026
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02311 0.5kb upstream 0.5kb upstream 4582 true Chr10: 28328892-28333473 Eucalyptus grandis
Eucgr.J02311 0.5kb upstream 0.5kb upstream 500 false Chr10: 28332974-28333473 Eucalyptus grandis
Eucgr.J02311 0.5kb downstream 0.5kb downstream 4582 true Chr10: 28328392-28332973 Eucalyptus grandis
Eucgr.J02311 0.5kb downstream 0.5kb downstream 500 false Chr10: 28328392-28328891 Eucalyptus grandis
Eucgr.J02311 1.0kb upstream 1.0kb upstream 5082 true Chr10: 28328892-28333973 Eucalyptus grandis
Eucgr.J02311 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28332974-28333973 Eucalyptus grandis
Eucgr.J02311 1.0kb downstream 1.0kb downstream 5082 true Chr10: 28327892-28332973 Eucalyptus grandis
Eucgr.J02311 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28327892-28328891 Eucalyptus grandis
Eucgr.J02311 2.0kb upstream 2.0kb upstream 6082 true Chr10: 28328892-28334973 Eucalyptus grandis
Eucgr.J02311 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28332974-28334973 Eucalyptus grandis
Eucgr.J02311 2.0kb downstream 2.0kb downstream 6082 true Chr10: 28326892-28332973 Eucalyptus grandis
Eucgr.J02311 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28326892-28328891 Eucalyptus grandis
Eucgr.J02311 5.0kb upstream 5.0kb upstream 9082 true Chr10: 28328892-28337973 Eucalyptus grandis
Eucgr.J02311 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28332974-28337973 Eucalyptus grandis
Eucgr.J02311 5.0kb downstream 5.0kb downstream 9082 true Chr10: 28323892-28332973 Eucalyptus grandis
Eucgr.J02311 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28323892-28328891 Eucalyptus grandis
Eucgr.J02311 10.0kb upstream 10.0kb upstream 14082 true Chr10: 28328892-28342973 Eucalyptus grandis
Eucgr.J02311 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28332974-28342973 Eucalyptus grandis
Eucgr.J02311 10.0kb downstream 10.0kb downstream 14082 true Chr10: 28318892-28332973 Eucalyptus grandis
Eucgr.J02311 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28318892-28328891 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067204 5270 Rosid View MSA
123739084 5271 Pentapetalae View MSA
122788457 5272 Eudicot View MSA
122042803 5273 Angiosperm View MSA
121347478 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75555 0.0 6.86786    
cufflinks 1.17307 0.0 3.15519    
cufflinks 1.21522 0.0 3.27032    
cufflinks 0.289417 0.0 0.906913 Low  
cufflinks 0.168056 0.0 0.568931 Low Low
cufflinks 6.0331 0.0 14.0428   High

0 Strain