Gene : Eucgr.J02262 E. grandis v2.0
Defline:  (1 of 9) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1920
Name:  ? Eucgr.J02262 Secondary Identifier:  ? PAC:32034366
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02262 0.5kb upstream 0.5kb upstream 7030 true Chr10: 27717897-27724926 Eucalyptus grandis
Eucgr.J02262 0.5kb upstream 0.5kb upstream 500 false Chr10: 27717897-27718396 Eucalyptus grandis
Eucgr.J02262 0.5kb downstream 0.5kb downstream 7030 true Chr10: 27718397-27725426 Eucalyptus grandis
Eucgr.J02262 0.5kb downstream 0.5kb downstream 500 false Chr10: 27724927-27725426 Eucalyptus grandis
Eucgr.J02262 1.0kb upstream 1.0kb upstream 7530 true Chr10: 27717397-27724926 Eucalyptus grandis
Eucgr.J02262 1.0kb upstream 1.0kb upstream 1000 false Chr10: 27717397-27718396 Eucalyptus grandis
Eucgr.J02262 1.0kb downstream 1.0kb downstream 7530 true Chr10: 27718397-27725926 Eucalyptus grandis
Eucgr.J02262 1.0kb downstream 1.0kb downstream 1000 false Chr10: 27724927-27725926 Eucalyptus grandis
Eucgr.J02262 2.0kb upstream 2.0kb upstream 8530 true Chr10: 27716397-27724926 Eucalyptus grandis
Eucgr.J02262 2.0kb upstream 2.0kb upstream 2000 false Chr10: 27716397-27718396 Eucalyptus grandis
Eucgr.J02262 2.0kb downstream 2.0kb downstream 8530 true Chr10: 27718397-27726926 Eucalyptus grandis
Eucgr.J02262 2.0kb downstream 2.0kb downstream 2000 false Chr10: 27724927-27726926 Eucalyptus grandis
Eucgr.J02262 5.0kb upstream 5.0kb upstream 11530 true Chr10: 27713397-27724926 Eucalyptus grandis
Eucgr.J02262 5.0kb upstream 5.0kb upstream 5000 false Chr10: 27713397-27718396 Eucalyptus grandis
Eucgr.J02262 5.0kb downstream 5.0kb downstream 11530 true Chr10: 27718397-27729926 Eucalyptus grandis
Eucgr.J02262 5.0kb downstream 5.0kb downstream 5000 false Chr10: 27724927-27729926 Eucalyptus grandis
Eucgr.J02262 10.0kb upstream 10.0kb upstream 16530 true Chr10: 27708397-27724926 Eucalyptus grandis
Eucgr.J02262 10.0kb upstream 10.0kb upstream 10000 false Chr10: 27708397-27718396 Eucalyptus grandis
Eucgr.J02262 10.0kb downstream 10.0kb downstream 16530 true Chr10: 27718397-27734926 Eucalyptus grandis
Eucgr.J02262 10.0kb downstream 10.0kb downstream 10000 false Chr10: 27724927-27734926 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067995 5270 Rosid View MSA
123737960 5271 Pentapetalae View MSA
122786713 5272 Eudicot View MSA
122046332 5273 Angiosperm View MSA
121347677 5274 Embryophyte View MSA
123426917 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7979 0.0 35.2104   High
cufflinks 9.05382 0.0 20.7055    
cufflinks 13.6211 0.0 30.48    
cufflinks 7.96344 0.0 18.3452    
cufflinks 8.03677 0.0 18.5893    
cufflinks 9.48714 0.0 21.7393    

0 Strain