Gene : Eucgr.J02260 E. grandis v2.0
Defline:  (1 of 1) KOG3038 - Histone acetyltransferase SAGA associated factor SGF29 Genomic Order:  1918
Name:  ? Eucgr.J02260 Secondary Identifier:  ? PAC:32034665
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02260 0.5kb upstream 0.5kb upstream 6528 true Chr10: 27698415-27704942 Eucalyptus grandis
Eucgr.J02260 0.5kb upstream 0.5kb upstream 500 false Chr10: 27698415-27698914 Eucalyptus grandis
Eucgr.J02260 0.5kb downstream 0.5kb downstream 6528 true Chr10: 27698915-27705442 Eucalyptus grandis
Eucgr.J02260 0.5kb downstream 0.5kb downstream 500 false Chr10: 27704943-27705442 Eucalyptus grandis
Eucgr.J02260 1.0kb upstream 1.0kb upstream 7028 true Chr10: 27697915-27704942 Eucalyptus grandis
Eucgr.J02260 1.0kb upstream 1.0kb upstream 1000 false Chr10: 27697915-27698914 Eucalyptus grandis
Eucgr.J02260 1.0kb downstream 1.0kb downstream 7028 true Chr10: 27698915-27705942 Eucalyptus grandis
Eucgr.J02260 1.0kb downstream 1.0kb downstream 1000 false Chr10: 27704943-27705942 Eucalyptus grandis
Eucgr.J02260 2.0kb upstream 2.0kb upstream 8028 true Chr10: 27696915-27704942 Eucalyptus grandis
Eucgr.J02260 2.0kb upstream 2.0kb upstream 2000 false Chr10: 27696915-27698914 Eucalyptus grandis
Eucgr.J02260 2.0kb downstream 2.0kb downstream 8028 true Chr10: 27698915-27706942 Eucalyptus grandis
Eucgr.J02260 2.0kb downstream 2.0kb downstream 2000 false Chr10: 27704943-27706942 Eucalyptus grandis
Eucgr.J02260 5.0kb upstream 5.0kb upstream 11028 true Chr10: 27693915-27704942 Eucalyptus grandis
Eucgr.J02260 5.0kb upstream 5.0kb upstream 5000 false Chr10: 27693915-27698914 Eucalyptus grandis
Eucgr.J02260 5.0kb downstream 5.0kb downstream 11028 true Chr10: 27698915-27709942 Eucalyptus grandis
Eucgr.J02260 5.0kb downstream 5.0kb downstream 5000 false Chr10: 27704943-27709942 Eucalyptus grandis
Eucgr.J02260 10.0kb upstream 10.0kb upstream 16028 true Chr10: 27688915-27704942 Eucalyptus grandis
Eucgr.J02260 10.0kb upstream 10.0kb upstream 10000 false Chr10: 27688915-27698914 Eucalyptus grandis
Eucgr.J02260 10.0kb downstream 10.0kb downstream 16028 true Chr10: 27698915-27714942 Eucalyptus grandis
Eucgr.J02260 10.0kb downstream 10.0kb downstream 10000 false Chr10: 27704943-27714942 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061243 5270 Rosid View MSA
123747151 5271 Pentapetalae View MSA
122789901 5272 Eudicot View MSA
122042873 5273 Angiosperm View MSA
121345271 5274 Embryophyte View MSA
123380184 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7797 0.0 39.9651    
cufflinks 15.433 0.0 34.8704    
cufflinks 19.2638 0.0 43.1002    
cufflinks 12.0189 0.0 27.5681    
cufflinks 23.5261 0.0 52.3126   High
cufflinks 5.93398 0.0 14.6183   Low

0 Strain