Gene : Eucgr.J02234 E. grandis v2.0
Defline:  (1 of 5) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Genomic Order:  1894
Name:  ? Eucgr.J02234 Secondary Identifier:  ? PAC:32034861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02234 0.5kb upstream 0.5kb upstream 3859 true Chr10: 27457980-27461838 Eucalyptus grandis
Eucgr.J02234 0.5kb upstream 0.5kb upstream 500 false Chr10: 27461339-27461838 Eucalyptus grandis
Eucgr.J02234 0.5kb downstream 0.5kb downstream 3859 true Chr10: 27457480-27461338 Eucalyptus grandis
Eucgr.J02234 0.5kb downstream 0.5kb downstream 500 false Chr10: 27457480-27457979 Eucalyptus grandis
Eucgr.J02234 1.0kb upstream 1.0kb upstream 4359 true Chr10: 27457980-27462338 Eucalyptus grandis
Eucgr.J02234 1.0kb upstream 1.0kb upstream 1000 false Chr10: 27461339-27462338 Eucalyptus grandis
Eucgr.J02234 1.0kb downstream 1.0kb downstream 4359 true Chr10: 27456980-27461338 Eucalyptus grandis
Eucgr.J02234 1.0kb downstream 1.0kb downstream 1000 false Chr10: 27456980-27457979 Eucalyptus grandis
Eucgr.J02234 2.0kb upstream 2.0kb upstream 5359 true Chr10: 27457980-27463338 Eucalyptus grandis
Eucgr.J02234 2.0kb upstream 2.0kb upstream 2000 false Chr10: 27461339-27463338 Eucalyptus grandis
Eucgr.J02234 2.0kb downstream 2.0kb downstream 5359 true Chr10: 27455980-27461338 Eucalyptus grandis
Eucgr.J02234 2.0kb downstream 2.0kb downstream 2000 false Chr10: 27455980-27457979 Eucalyptus grandis
Eucgr.J02234 5.0kb upstream 5.0kb upstream 8359 true Chr10: 27457980-27466338 Eucalyptus grandis
Eucgr.J02234 5.0kb upstream 5.0kb upstream 5000 false Chr10: 27461339-27466338 Eucalyptus grandis
Eucgr.J02234 5.0kb downstream 5.0kb downstream 8359 true Chr10: 27452980-27461338 Eucalyptus grandis
Eucgr.J02234 5.0kb downstream 5.0kb downstream 5000 false Chr10: 27452980-27457979 Eucalyptus grandis
Eucgr.J02234 10.0kb upstream 10.0kb upstream 13359 true Chr10: 27457980-27471338 Eucalyptus grandis
Eucgr.J02234 10.0kb upstream 10.0kb upstream 10000 false Chr10: 27461339-27471338 Eucalyptus grandis
Eucgr.J02234 10.0kb downstream 10.0kb downstream 13359 true Chr10: 27447980-27461338 Eucalyptus grandis
Eucgr.J02234 10.0kb downstream 10.0kb downstream 10000 false Chr10: 27447980-27457979 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.851 0.0 39.6431    
cufflinks 26.8288 0.0 59.3319   High
cufflinks 14.9881 0.0 33.4762   Low
cufflinks 24.04 0.0 53.1749   High
cufflinks 16.7676 0.0 37.2873    
cufflinks 16.1625 0.0 35.9486    

0 Strain