Gene : Eucgr.J02224 E. grandis v2.0
Defline:  (1 of 1) PTHR11252:SF3 - POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  1884
Name:  ? Eucgr.J02224 Secondary Identifier:  ? PAC:32033638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02224 0.5kb upstream 0.5kb upstream 9900 true Chr10: 27398776-27408675 Eucalyptus grandis
Eucgr.J02224 0.5kb upstream 0.5kb upstream 500 false Chr10: 27398776-27399275 Eucalyptus grandis
Eucgr.J02224 0.5kb downstream 0.5kb downstream 9900 true Chr10: 27399276-27409175 Eucalyptus grandis
Eucgr.J02224 0.5kb downstream 0.5kb downstream 500 false Chr10: 27408676-27409175 Eucalyptus grandis
Eucgr.J02224 1.0kb upstream 1.0kb upstream 10400 true Chr10: 27398276-27408675 Eucalyptus grandis
Eucgr.J02224 1.0kb upstream 1.0kb upstream 1000 false Chr10: 27398276-27399275 Eucalyptus grandis
Eucgr.J02224 1.0kb downstream 1.0kb downstream 10400 true Chr10: 27399276-27409675 Eucalyptus grandis
Eucgr.J02224 1.0kb downstream 1.0kb downstream 1000 false Chr10: 27408676-27409675 Eucalyptus grandis
Eucgr.J02224 2.0kb upstream 2.0kb upstream 11400 true Chr10: 27397276-27408675 Eucalyptus grandis
Eucgr.J02224 2.0kb upstream 2.0kb upstream 2000 false Chr10: 27397276-27399275 Eucalyptus grandis
Eucgr.J02224 2.0kb downstream 2.0kb downstream 11400 true Chr10: 27399276-27410675 Eucalyptus grandis
Eucgr.J02224 2.0kb downstream 2.0kb downstream 2000 false Chr10: 27408676-27410675 Eucalyptus grandis
Eucgr.J02224 5.0kb upstream 5.0kb upstream 14400 true Chr10: 27394276-27408675 Eucalyptus grandis
Eucgr.J02224 5.0kb upstream 5.0kb upstream 5000 false Chr10: 27394276-27399275 Eucalyptus grandis
Eucgr.J02224 5.0kb downstream 5.0kb downstream 14400 true Chr10: 27399276-27413675 Eucalyptus grandis
Eucgr.J02224 5.0kb downstream 5.0kb downstream 5000 false Chr10: 27408676-27413675 Eucalyptus grandis
Eucgr.J02224 10.0kb upstream 10.0kb upstream 19400 true Chr10: 27389276-27408675 Eucalyptus grandis
Eucgr.J02224 10.0kb upstream 10.0kb upstream 10000 false Chr10: 27389276-27399275 Eucalyptus grandis
Eucgr.J02224 10.0kb downstream 10.0kb downstream 19400 true Chr10: 27399276-27418675 Eucalyptus grandis
Eucgr.J02224 10.0kb downstream 10.0kb downstream 10000 false Chr10: 27408676-27418675 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060543 5270 Rosid View MSA
123737032 5271 Pentapetalae View MSA
122787659 5272 Eudicot View MSA
122046246 5273 Angiosperm View MSA
121345190 5274 Embryophyte View MSA
123425346 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.85578 0.0 6.87019    
cufflinks 1.23859 0.0 3.22458   Low
cufflinks 3.37011 0.0 7.95773    
cufflinks 1.54969 0.0 3.937    
cufflinks 1.74672 0.0 4.40594    
cufflinks 5.18354 0.0 11.8778   High

0 Strain