Gene : Eucgr.J02171 E. grandis v2.0
Defline:  (1 of 1) PTHR13343:SF17 - CELLULAR REPRESSOR OF E1A-STIMULATED GENES, ISOFORM A Genomic Order:  1839
Name:  ? Eucgr.J02171 Secondary Identifier:  ? PAC:32032628
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02171 0.5kb upstream 0.5kb upstream 3374 true Chr10: 26967160-26970533 Eucalyptus grandis
Eucgr.J02171 0.5kb upstream 0.5kb upstream 500 false Chr10: 26967160-26967659 Eucalyptus grandis
Eucgr.J02171 0.5kb downstream 0.5kb downstream 3374 true Chr10: 26967660-26971033 Eucalyptus grandis
Eucgr.J02171 0.5kb downstream 0.5kb downstream 500 false Chr10: 26970534-26971033 Eucalyptus grandis
Eucgr.J02171 1.0kb upstream 1.0kb upstream 3874 true Chr10: 26966660-26970533 Eucalyptus grandis
Eucgr.J02171 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26966660-26967659 Eucalyptus grandis
Eucgr.J02171 1.0kb downstream 1.0kb downstream 3874 true Chr10: 26967660-26971533 Eucalyptus grandis
Eucgr.J02171 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26970534-26971533 Eucalyptus grandis
Eucgr.J02171 2.0kb upstream 2.0kb upstream 4874 true Chr10: 26965660-26970533 Eucalyptus grandis
Eucgr.J02171 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26965660-26967659 Eucalyptus grandis
Eucgr.J02171 2.0kb downstream 2.0kb downstream 4874 true Chr10: 26967660-26972533 Eucalyptus grandis
Eucgr.J02171 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26970534-26972533 Eucalyptus grandis
Eucgr.J02171 5.0kb upstream 5.0kb upstream 7874 true Chr10: 26962660-26970533 Eucalyptus grandis
Eucgr.J02171 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26962660-26967659 Eucalyptus grandis
Eucgr.J02171 5.0kb downstream 5.0kb downstream 7874 true Chr10: 26967660-26975533 Eucalyptus grandis
Eucgr.J02171 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26970534-26975533 Eucalyptus grandis
Eucgr.J02171 10.0kb upstream 10.0kb upstream 12874 true Chr10: 26957660-26970533 Eucalyptus grandis
Eucgr.J02171 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26957660-26967659 Eucalyptus grandis
Eucgr.J02171 10.0kb downstream 10.0kb downstream 12874 true Chr10: 26967660-26980533 Eucalyptus grandis
Eucgr.J02171 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26970534-26980533 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060468 5270 Rosid View MSA
123752087 5271 Pentapetalae View MSA
122795497 5272 Eudicot View MSA
122043894 5273 Angiosperm View MSA
121347354 5274 Embryophyte View MSA
123424042 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3059 0.0 30.1638   Low
cufflinks 21.5294 0.0 49.7977    
cufflinks 16.985 0.0 40.1301    
cufflinks 31.0719 0.0 72.4384   High
cufflinks 25.73 0.0 58.8426    
cufflinks 20.1558 0.0 46.9223    

0 Strain