Gene : Eucgr.J02153 E. grandis v2.0
Defline:  (1 of 3) PTHR10869:SF55 - OXOGLUTARATE/IRON-DEPENDENT OXYGENASE Genomic Order:  1822
Name:  ? Eucgr.J02153 Secondary Identifier:  ? PAC:32034887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02153 0.5kb upstream 0.5kb upstream 3883 true Chr10: 26771649-26775531 Eucalyptus grandis
Eucgr.J02153 0.5kb upstream 0.5kb upstream 500 false Chr10: 26771649-26772148 Eucalyptus grandis
Eucgr.J02153 0.5kb downstream 0.5kb downstream 3883 true Chr10: 26772149-26776031 Eucalyptus grandis
Eucgr.J02153 0.5kb downstream 0.5kb downstream 500 false Chr10: 26775532-26776031 Eucalyptus grandis
Eucgr.J02153 1.0kb upstream 1.0kb upstream 4383 true Chr10: 26771149-26775531 Eucalyptus grandis
Eucgr.J02153 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26771149-26772148 Eucalyptus grandis
Eucgr.J02153 1.0kb downstream 1.0kb downstream 4383 true Chr10: 26772149-26776531 Eucalyptus grandis
Eucgr.J02153 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26775532-26776531 Eucalyptus grandis
Eucgr.J02153 2.0kb upstream 2.0kb upstream 5383 true Chr10: 26770149-26775531 Eucalyptus grandis
Eucgr.J02153 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26770149-26772148 Eucalyptus grandis
Eucgr.J02153 2.0kb downstream 2.0kb downstream 5383 true Chr10: 26772149-26777531 Eucalyptus grandis
Eucgr.J02153 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26775532-26777531 Eucalyptus grandis
Eucgr.J02153 5.0kb upstream 5.0kb upstream 8383 true Chr10: 26767149-26775531 Eucalyptus grandis
Eucgr.J02153 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26767149-26772148 Eucalyptus grandis
Eucgr.J02153 5.0kb downstream 5.0kb downstream 8383 true Chr10: 26772149-26780531 Eucalyptus grandis
Eucgr.J02153 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26775532-26780531 Eucalyptus grandis
Eucgr.J02153 10.0kb upstream 10.0kb upstream 13383 true Chr10: 26762149-26775531 Eucalyptus grandis
Eucgr.J02153 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26762149-26772148 Eucalyptus grandis
Eucgr.J02153 10.0kb downstream 10.0kb downstream 13383 true Chr10: 26772149-26785531 Eucalyptus grandis
Eucgr.J02153 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26775532-26785531 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068610 5270 Rosid View MSA
123740803 5271 Pentapetalae View MSA
122792927 5272 Eudicot View MSA
122045302 5273 Angiosperm View MSA
121349816 5274 Embryophyte View MSA
123428732 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.7778 0.0 79.2721 High  
cufflinks 34.8818 0.0 89.9308    
cufflinks 38.0549 0.0 94.8997 High  
cufflinks 51.0636 0.0 132.212 High High
cufflinks 18.3478 0.0 46.5684   Low
cufflinks 21.1409 0.0 48.2681    

0 Strain