Gene : Eucgr.J02122 E. grandis v2.0
Defline:  (1 of 2) 6.3.2.17 - Tetrahydrofolate synthase / Tetrahydrofolylpolyglutamate synthase Genomic Order:  1796
Name:  ? Eucgr.J02122 Secondary Identifier:  ? PAC:32034306
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-2161 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02122 0.5kb upstream 0.5kb upstream 8313 true Chr10: 26428053-26436365 Eucalyptus grandis
Eucgr.J02122 0.5kb upstream 0.5kb upstream 500 false Chr10: 26428053-26428552 Eucalyptus grandis
Eucgr.J02122 0.5kb downstream 0.5kb downstream 8313 true Chr10: 26428553-26436865 Eucalyptus grandis
Eucgr.J02122 0.5kb downstream 0.5kb downstream 500 false Chr10: 26436366-26436865 Eucalyptus grandis
Eucgr.J02122 1.0kb upstream 1.0kb upstream 8813 true Chr10: 26427553-26436365 Eucalyptus grandis
Eucgr.J02122 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26427553-26428552 Eucalyptus grandis
Eucgr.J02122 1.0kb downstream 1.0kb downstream 8813 true Chr10: 26428553-26437365 Eucalyptus grandis
Eucgr.J02122 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26436366-26437365 Eucalyptus grandis
Eucgr.J02122 2.0kb upstream 2.0kb upstream 9813 true Chr10: 26426553-26436365 Eucalyptus grandis
Eucgr.J02122 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26426553-26428552 Eucalyptus grandis
Eucgr.J02122 2.0kb downstream 2.0kb downstream 9813 true Chr10: 26428553-26438365 Eucalyptus grandis
Eucgr.J02122 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26436366-26438365 Eucalyptus grandis
Eucgr.J02122 5.0kb upstream 5.0kb upstream 12813 true Chr10: 26423553-26436365 Eucalyptus grandis
Eucgr.J02122 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26423553-26428552 Eucalyptus grandis
Eucgr.J02122 5.0kb downstream 5.0kb downstream 12813 true Chr10: 26428553-26441365 Eucalyptus grandis
Eucgr.J02122 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26436366-26441365 Eucalyptus grandis
Eucgr.J02122 10.0kb upstream 10.0kb upstream 17813 true Chr10: 26418553-26436365 Eucalyptus grandis
Eucgr.J02122 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26418553-26428552 Eucalyptus grandis
Eucgr.J02122 10.0kb downstream 10.0kb downstream 17813 true Chr10: 26428553-26446365 Eucalyptus grandis
Eucgr.J02122 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26436366-26446365 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068713 5270 Rosid View MSA
123740446 5271 Pentapetalae View MSA
122786147 5272 Eudicot View MSA
122044962 5273 Angiosperm View MSA
121349297 5274 Embryophyte View MSA
123426614 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3839 0.0 34.2363    
cufflinks 18.8152 0.0 42.2833    
cufflinks 11.9537 0.0 30.3635    
cufflinks 12.2594 0.0 28.0519    
cufflinks 7.48932 0.0 17.2505   Low
cufflinks 21.9101 0.0 54.4553   High

0 Strain