Gene : Eucgr.J02123 E. grandis v2.0
Defline:  (1 of 1) PTHR22847:SF450 - PROTEIN NEDD1 Genomic Order:  1797
Name:  ? Eucgr.J02123 Secondary Identifier:  ? PAC:32035308
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02123 0.5kb upstream 0.5kb upstream 7410 true Chr10: 26436924-26444333 Eucalyptus grandis
Eucgr.J02123 0.5kb upstream 0.5kb upstream 500 false Chr10: 26443834-26444333 Eucalyptus grandis
Eucgr.J02123 0.5kb downstream 0.5kb downstream 7410 true Chr10: 26436424-26443833 Eucalyptus grandis
Eucgr.J02123 0.5kb downstream 0.5kb downstream 500 false Chr10: 26436424-26436923 Eucalyptus grandis
Eucgr.J02123 1.0kb upstream 1.0kb upstream 7910 true Chr10: 26436924-26444833 Eucalyptus grandis
Eucgr.J02123 1.0kb upstream 1.0kb upstream 1000 false Chr10: 26443834-26444833 Eucalyptus grandis
Eucgr.J02123 1.0kb downstream 1.0kb downstream 7910 true Chr10: 26435924-26443833 Eucalyptus grandis
Eucgr.J02123 1.0kb downstream 1.0kb downstream 1000 false Chr10: 26435924-26436923 Eucalyptus grandis
Eucgr.J02123 2.0kb upstream 2.0kb upstream 8910 true Chr10: 26436924-26445833 Eucalyptus grandis
Eucgr.J02123 2.0kb upstream 2.0kb upstream 2000 false Chr10: 26443834-26445833 Eucalyptus grandis
Eucgr.J02123 2.0kb downstream 2.0kb downstream 8910 true Chr10: 26434924-26443833 Eucalyptus grandis
Eucgr.J02123 2.0kb downstream 2.0kb downstream 2000 false Chr10: 26434924-26436923 Eucalyptus grandis
Eucgr.J02123 5.0kb upstream 5.0kb upstream 11910 true Chr10: 26436924-26448833 Eucalyptus grandis
Eucgr.J02123 5.0kb upstream 5.0kb upstream 5000 false Chr10: 26443834-26448833 Eucalyptus grandis
Eucgr.J02123 5.0kb downstream 5.0kb downstream 11910 true Chr10: 26431924-26443833 Eucalyptus grandis
Eucgr.J02123 5.0kb downstream 5.0kb downstream 5000 false Chr10: 26431924-26436923 Eucalyptus grandis
Eucgr.J02123 10.0kb upstream 10.0kb upstream 16910 true Chr10: 26436924-26453833 Eucalyptus grandis
Eucgr.J02123 10.0kb upstream 10.0kb upstream 10000 false Chr10: 26443834-26453833 Eucalyptus grandis
Eucgr.J02123 10.0kb downstream 10.0kb downstream 16910 true Chr10: 26426924-26443833 Eucalyptus grandis
Eucgr.J02123 10.0kb downstream 10.0kb downstream 10000 false Chr10: 26426924-26436923 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041012 5273 Angiosperm View MSA
124066799 5270 Rosid View MSA
123740021 5271 Pentapetalae View MSA
122787033 5272 Eudicot View MSA
121345186 5274 Embryophyte View MSA
123426376 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.51665 0.0 15.5484    
cufflinks 8.02361 0.0 18.5966    
cufflinks 4.73906 0.0 11.0154    
cufflinks 13.3522 0.0 30.0078   High
cufflinks 7.76349 0.0 17.9894    
cufflinks 4.4951 0.0 10.555   Low

0 Strain