Gene : Eucgr.J02058 E. grandis v2.0
Defline:  (1 of 2) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  1735
Name:  ? Eucgr.J02058 Secondary Identifier:  ? PAC:32035613
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7511 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02058 0.5kb upstream 0.5kb upstream 4438 true Chr10: 25803562-25807999 Eucalyptus grandis
Eucgr.J02058 0.5kb upstream 0.5kb upstream 500 false Chr10: 25803562-25804061 Eucalyptus grandis
Eucgr.J02058 0.5kb downstream 0.5kb downstream 4438 true Chr10: 25804062-25808499 Eucalyptus grandis
Eucgr.J02058 0.5kb downstream 0.5kb downstream 500 false Chr10: 25808000-25808499 Eucalyptus grandis
Eucgr.J02058 1.0kb upstream 1.0kb upstream 4938 true Chr10: 25803062-25807999 Eucalyptus grandis
Eucgr.J02058 1.0kb upstream 1.0kb upstream 1000 false Chr10: 25803062-25804061 Eucalyptus grandis
Eucgr.J02058 1.0kb downstream 1.0kb downstream 4938 true Chr10: 25804062-25808999 Eucalyptus grandis
Eucgr.J02058 1.0kb downstream 1.0kb downstream 1000 false Chr10: 25808000-25808999 Eucalyptus grandis
Eucgr.J02058 2.0kb upstream 2.0kb upstream 5938 true Chr10: 25802062-25807999 Eucalyptus grandis
Eucgr.J02058 2.0kb upstream 2.0kb upstream 2000 false Chr10: 25802062-25804061 Eucalyptus grandis
Eucgr.J02058 2.0kb downstream 2.0kb downstream 5938 true Chr10: 25804062-25809999 Eucalyptus grandis
Eucgr.J02058 2.0kb downstream 2.0kb downstream 2000 false Chr10: 25808000-25809999 Eucalyptus grandis
Eucgr.J02058 5.0kb upstream 5.0kb upstream 8938 true Chr10: 25799062-25807999 Eucalyptus grandis
Eucgr.J02058 5.0kb upstream 5.0kb upstream 5000 false Chr10: 25799062-25804061 Eucalyptus grandis
Eucgr.J02058 5.0kb downstream 5.0kb downstream 8938 true Chr10: 25804062-25812999 Eucalyptus grandis
Eucgr.J02058 5.0kb downstream 5.0kb downstream 5000 false Chr10: 25808000-25812999 Eucalyptus grandis
Eucgr.J02058 10.0kb upstream 10.0kb upstream 13938 true Chr10: 25794062-25807999 Eucalyptus grandis
Eucgr.J02058 10.0kb upstream 10.0kb upstream 10000 false Chr10: 25794062-25804061 Eucalyptus grandis
Eucgr.J02058 10.0kb downstream 10.0kb downstream 13938 true Chr10: 25804062-25817999 Eucalyptus grandis
Eucgr.J02058 10.0kb downstream 10.0kb downstream 10000 false Chr10: 25808000-25817999 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.456 0.0 88.8221 High  
cufflinks 106.83 0.0 259.666 High  
cufflinks 33.0919 0.0 73.902 High Low
cufflinks 215.84 0.0 572.372 High High
cufflinks 245.043 0.0 663.528 High High
cufflinks 55.7332 0.0 128.159 High  

0 Strain