Gene : Eucgr.J02042 E. grandis v2.0
Defline:  (1 of 13) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  1719
Name:  ? Eucgr.J02042 Secondary Identifier:  ? PAC:32034066
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02042 0.5kb upstream 0.5kb upstream 3506 true Chr10: 25671693-25675198 Eucalyptus grandis
Eucgr.J02042 0.5kb upstream 0.5kb upstream 500 false Chr10: 25674699-25675198 Eucalyptus grandis
Eucgr.J02042 0.5kb downstream 0.5kb downstream 3506 true Chr10: 25671193-25674698 Eucalyptus grandis
Eucgr.J02042 0.5kb downstream 0.5kb downstream 500 false Chr10: 25671193-25671692 Eucalyptus grandis
Eucgr.J02042 1.0kb upstream 1.0kb upstream 4006 true Chr10: 25671693-25675698 Eucalyptus grandis
Eucgr.J02042 1.0kb upstream 1.0kb upstream 1000 false Chr10: 25674699-25675698 Eucalyptus grandis
Eucgr.J02042 1.0kb downstream 1.0kb downstream 4006 true Chr10: 25670693-25674698 Eucalyptus grandis
Eucgr.J02042 1.0kb downstream 1.0kb downstream 1000 false Chr10: 25670693-25671692 Eucalyptus grandis
Eucgr.J02042 2.0kb upstream 2.0kb upstream 5006 true Chr10: 25671693-25676698 Eucalyptus grandis
Eucgr.J02042 2.0kb upstream 2.0kb upstream 2000 false Chr10: 25674699-25676698 Eucalyptus grandis
Eucgr.J02042 2.0kb downstream 2.0kb downstream 5006 true Chr10: 25669693-25674698 Eucalyptus grandis
Eucgr.J02042 2.0kb downstream 2.0kb downstream 2000 false Chr10: 25669693-25671692 Eucalyptus grandis
Eucgr.J02042 5.0kb upstream 5.0kb upstream 8006 true Chr10: 25671693-25679698 Eucalyptus grandis
Eucgr.J02042 5.0kb upstream 5.0kb upstream 5000 false Chr10: 25674699-25679698 Eucalyptus grandis
Eucgr.J02042 5.0kb downstream 5.0kb downstream 8006 true Chr10: 25666693-25674698 Eucalyptus grandis
Eucgr.J02042 5.0kb downstream 5.0kb downstream 5000 false Chr10: 25666693-25671692 Eucalyptus grandis
Eucgr.J02042 10.0kb upstream 10.0kb upstream 13006 true Chr10: 25671693-25684698 Eucalyptus grandis
Eucgr.J02042 10.0kb upstream 10.0kb upstream 10000 false Chr10: 25674699-25684698 Eucalyptus grandis
Eucgr.J02042 10.0kb downstream 10.0kb downstream 13006 true Chr10: 25661693-25674698 Eucalyptus grandis
Eucgr.J02042 10.0kb downstream 10.0kb downstream 10000 false Chr10: 25661693-25671692 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.28483 0.0 18.6854    
cufflinks 13.4892 0.0 29.8897    
cufflinks 15.258 0.0 33.7674    
cufflinks 13.3251 0.0 29.5241    
cufflinks 17.2894 0.0 38.2346    
cufflinks 4.93563 0.0 11.5727   Low

0 Strain