Gene : Eucgr.J02044 E. grandis v2.0
Defline:  (1 of 13) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  1721
Name:  ? Eucgr.J02044 Secondary Identifier:  ? PAC:32032902
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02044 0.5kb upstream 0.5kb upstream 3785 true Chr10: 25720925-25724709 Eucalyptus grandis
Eucgr.J02044 0.5kb upstream 0.5kb upstream 500 false Chr10: 25724210-25724709 Eucalyptus grandis
Eucgr.J02044 0.5kb downstream 0.5kb downstream 3785 true Chr10: 25720425-25724209 Eucalyptus grandis
Eucgr.J02044 0.5kb downstream 0.5kb downstream 500 false Chr10: 25720425-25720924 Eucalyptus grandis
Eucgr.J02044 1.0kb upstream 1.0kb upstream 4285 true Chr10: 25720925-25725209 Eucalyptus grandis
Eucgr.J02044 1.0kb upstream 1.0kb upstream 1000 false Chr10: 25724210-25725209 Eucalyptus grandis
Eucgr.J02044 1.0kb downstream 1.0kb downstream 4285 true Chr10: 25719925-25724209 Eucalyptus grandis
Eucgr.J02044 1.0kb downstream 1.0kb downstream 1000 false Chr10: 25719925-25720924 Eucalyptus grandis
Eucgr.J02044 2.0kb upstream 2.0kb upstream 5285 true Chr10: 25720925-25726209 Eucalyptus grandis
Eucgr.J02044 2.0kb upstream 2.0kb upstream 2000 false Chr10: 25724210-25726209 Eucalyptus grandis
Eucgr.J02044 2.0kb downstream 2.0kb downstream 5285 true Chr10: 25718925-25724209 Eucalyptus grandis
Eucgr.J02044 2.0kb downstream 2.0kb downstream 2000 false Chr10: 25718925-25720924 Eucalyptus grandis
Eucgr.J02044 5.0kb upstream 5.0kb upstream 8285 true Chr10: 25720925-25729209 Eucalyptus grandis
Eucgr.J02044 5.0kb upstream 5.0kb upstream 5000 false Chr10: 25724210-25729209 Eucalyptus grandis
Eucgr.J02044 5.0kb downstream 5.0kb downstream 8285 true Chr10: 25715925-25724209 Eucalyptus grandis
Eucgr.J02044 5.0kb downstream 5.0kb downstream 5000 false Chr10: 25715925-25720924 Eucalyptus grandis
Eucgr.J02044 10.0kb upstream 10.0kb upstream 13285 true Chr10: 25720925-25734209 Eucalyptus grandis
Eucgr.J02044 10.0kb upstream 10.0kb upstream 10000 false Chr10: 25724210-25734209 Eucalyptus grandis
Eucgr.J02044 10.0kb downstream 10.0kb downstream 13285 true Chr10: 25710925-25724209 Eucalyptus grandis
Eucgr.J02044 10.0kb downstream 10.0kb downstream 10000 false Chr10: 25710925-25720924 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9466 0.0 30.8802    
cufflinks 24.3514 0.0 54.1158   High
cufflinks 16.5532 0.0 36.6062    
cufflinks 15.6684 0.0 34.65    
cufflinks 5.74779 0.0 13.1756   Low
cufflinks 16.0439 0.0 35.4874    

0 Strain