Gene : Eucgr.J02840 E. grandis v2.0
Defline:  (1 of 10) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  2343
Name:  ? Eucgr.J02840 Secondary Identifier:  ? PAC:32035712
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02840 0.5kb upstream 0.5kb upstream 3378 true Chr10: 33810912-33814289 Eucalyptus grandis
Eucgr.J02840 0.5kb upstream 0.5kb upstream 500 false Chr10: 33813790-33814289 Eucalyptus grandis
Eucgr.J02840 0.5kb downstream 0.5kb downstream 3378 true Chr10: 33810412-33813789 Eucalyptus grandis
Eucgr.J02840 0.5kb downstream 0.5kb downstream 500 false Chr10: 33810412-33810911 Eucalyptus grandis
Eucgr.J02840 1.0kb upstream 1.0kb upstream 3878 true Chr10: 33810912-33814789 Eucalyptus grandis
Eucgr.J02840 1.0kb upstream 1.0kb upstream 1000 false Chr10: 33813790-33814789 Eucalyptus grandis
Eucgr.J02840 1.0kb downstream 1.0kb downstream 3878 true Chr10: 33809912-33813789 Eucalyptus grandis
Eucgr.J02840 1.0kb downstream 1.0kb downstream 1000 false Chr10: 33809912-33810911 Eucalyptus grandis
Eucgr.J02840 2.0kb upstream 2.0kb upstream 4878 true Chr10: 33810912-33815789 Eucalyptus grandis
Eucgr.J02840 2.0kb upstream 2.0kb upstream 2000 false Chr10: 33813790-33815789 Eucalyptus grandis
Eucgr.J02840 2.0kb downstream 2.0kb downstream 4878 true Chr10: 33808912-33813789 Eucalyptus grandis
Eucgr.J02840 2.0kb downstream 2.0kb downstream 2000 false Chr10: 33808912-33810911 Eucalyptus grandis
Eucgr.J02840 5.0kb upstream 5.0kb upstream 7878 true Chr10: 33810912-33818789 Eucalyptus grandis
Eucgr.J02840 5.0kb upstream 5.0kb upstream 5000 false Chr10: 33813790-33818789 Eucalyptus grandis
Eucgr.J02840 5.0kb downstream 5.0kb downstream 7878 true Chr10: 33805912-33813789 Eucalyptus grandis
Eucgr.J02840 5.0kb downstream 5.0kb downstream 5000 false Chr10: 33805912-33810911 Eucalyptus grandis
Eucgr.J02840 10.0kb upstream 10.0kb upstream 12878 true Chr10: 33810912-33823789 Eucalyptus grandis
Eucgr.J02840 10.0kb upstream 10.0kb upstream 10000 false Chr10: 33813790-33823789 Eucalyptus grandis
Eucgr.J02840 10.0kb downstream 10.0kb downstream 12878 true Chr10: 33800912-33813789 Eucalyptus grandis
Eucgr.J02840 10.0kb downstream 10.0kb downstream 10000 false Chr10: 33800912-33810911 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
124063459 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.3275 0.0 48.8402    
cufflinks 20.7617 0.0 47.4807    
cufflinks 20.1117 0.0 46.2179    
cufflinks 22.0601 0.0 50.1941    
cufflinks 7.37985 0.0 18.615   Low
cufflinks 18.8957 0.0 43.8241    

0 Strain