Gene : Eucgr.J02598 E. grandis v2.0
Defline:  (1 of 4) 2.7.1.150 - 1-phosphatidylinositol-3-phosphate 5-kinase / Type III PIP kinase Genomic Order:  2210
Name:  ? Eucgr.J02598 Secondary Identifier:  ? PAC:32034145
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6352 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02598 0.5kb upstream 0.5kb upstream 10581 true Chr10: 30988318-30998898 Eucalyptus grandis
Eucgr.J02598 0.5kb upstream 0.5kb upstream 500 false Chr10: 30998399-30998898 Eucalyptus grandis
Eucgr.J02598 0.5kb downstream 0.5kb downstream 10581 true Chr10: 30987818-30998398 Eucalyptus grandis
Eucgr.J02598 0.5kb downstream 0.5kb downstream 500 false Chr10: 30987818-30988317 Eucalyptus grandis
Eucgr.J02598 1.0kb upstream 1.0kb upstream 11081 true Chr10: 30988318-30999398 Eucalyptus grandis
Eucgr.J02598 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30998399-30999398 Eucalyptus grandis
Eucgr.J02598 1.0kb downstream 1.0kb downstream 11081 true Chr10: 30987318-30998398 Eucalyptus grandis
Eucgr.J02598 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30987318-30988317 Eucalyptus grandis
Eucgr.J02598 2.0kb upstream 2.0kb upstream 12081 true Chr10: 30988318-31000398 Eucalyptus grandis
Eucgr.J02598 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30998399-31000398 Eucalyptus grandis
Eucgr.J02598 2.0kb downstream 2.0kb downstream 12081 true Chr10: 30986318-30998398 Eucalyptus grandis
Eucgr.J02598 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30986318-30988317 Eucalyptus grandis
Eucgr.J02598 5.0kb upstream 5.0kb upstream 15081 true Chr10: 30988318-31003398 Eucalyptus grandis
Eucgr.J02598 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30998399-31003398 Eucalyptus grandis
Eucgr.J02598 5.0kb downstream 5.0kb downstream 15081 true Chr10: 30983318-30998398 Eucalyptus grandis
Eucgr.J02598 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30983318-30988317 Eucalyptus grandis
Eucgr.J02598 10.0kb upstream 10.0kb upstream 20081 true Chr10: 30988318-31008398 Eucalyptus grandis
Eucgr.J02598 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30998399-31008398 Eucalyptus grandis
Eucgr.J02598 10.0kb downstream 10.0kb downstream 20081 true Chr10: 30978318-30998398 Eucalyptus grandis
Eucgr.J02598 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30978318-30988317 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7233 0.0 28.3443    
cufflinks 38.7849 0.0 93.3919    
cufflinks 13.7004 0.0 30.6361    
cufflinks 54.0392 0.0 135.29 High High
cufflinks 49.8369 0.0 123.06 High  
cufflinks 13.6387 0.0 30.4072    

0 Strain