Gene : Eucgr.J02541 E. grandis v2.0
Defline:  (1 of 14) PTHR13954:SF13 - SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1B Genomic Order:  2158
Name:  ? Eucgr.J02541 Secondary Identifier:  ? PAC:32035255
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02541 0.5kb upstream 0.5kb upstream 7404 true Chr10: 30525358-30532761 Eucalyptus grandis
Eucgr.J02541 0.5kb upstream 0.5kb upstream 500 false Chr10: 30532262-30532761 Eucalyptus grandis
Eucgr.J02541 0.5kb downstream 0.5kb downstream 7404 true Chr10: 30524858-30532261 Eucalyptus grandis
Eucgr.J02541 0.5kb downstream 0.5kb downstream 500 false Chr10: 30524858-30525357 Eucalyptus grandis
Eucgr.J02541 1.0kb upstream 1.0kb upstream 7904 true Chr10: 30525358-30533261 Eucalyptus grandis
Eucgr.J02541 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30532262-30533261 Eucalyptus grandis
Eucgr.J02541 1.0kb downstream 1.0kb downstream 7904 true Chr10: 30524358-30532261 Eucalyptus grandis
Eucgr.J02541 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30524358-30525357 Eucalyptus grandis
Eucgr.J02541 2.0kb upstream 2.0kb upstream 8904 true Chr10: 30525358-30534261 Eucalyptus grandis
Eucgr.J02541 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30532262-30534261 Eucalyptus grandis
Eucgr.J02541 2.0kb downstream 2.0kb downstream 8904 true Chr10: 30523358-30532261 Eucalyptus grandis
Eucgr.J02541 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30523358-30525357 Eucalyptus grandis
Eucgr.J02541 5.0kb upstream 5.0kb upstream 11904 true Chr10: 30525358-30537261 Eucalyptus grandis
Eucgr.J02541 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30532262-30537261 Eucalyptus grandis
Eucgr.J02541 5.0kb downstream 5.0kb downstream 11904 true Chr10: 30520358-30532261 Eucalyptus grandis
Eucgr.J02541 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30520358-30525357 Eucalyptus grandis
Eucgr.J02541 10.0kb upstream 10.0kb upstream 16904 true Chr10: 30525358-30542261 Eucalyptus grandis
Eucgr.J02541 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30532262-30542261 Eucalyptus grandis
Eucgr.J02541 10.0kb downstream 10.0kb downstream 16904 true Chr10: 30515358-30532261 Eucalyptus grandis
Eucgr.J02541 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30515358-30525357 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0078 0.0 30.1263    
cufflinks 10.8057 0.0 24.3664    
cufflinks 11.9875 0.0 27.5852    
cufflinks 14.3048 0.0 32.2057   High
cufflinks 10.1656 0.0 24.683   Low
cufflinks 12.9723 0.0 29.0908    

0 Strain