Gene : Eucgr.J02538 E. grandis v2.0
Defline:  (1 of 1) PTHR10073:SF7 - DNA MISMATCH REPAIR PROTEIN MLH3-RELATED Genomic Order:  2155
Name:  ? Eucgr.J02538 Secondary Identifier:  ? PAC:32035442
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02538 0.5kb upstream 0.5kb upstream 10387 true Chr10: 30509122-30519508 Eucalyptus grandis
Eucgr.J02538 0.5kb upstream 0.5kb upstream 500 false Chr10: 30519009-30519508 Eucalyptus grandis
Eucgr.J02538 0.5kb downstream 0.5kb downstream 10387 true Chr10: 30508622-30519008 Eucalyptus grandis
Eucgr.J02538 0.5kb downstream 0.5kb downstream 500 false Chr10: 30508622-30509121 Eucalyptus grandis
Eucgr.J02538 1.0kb upstream 1.0kb upstream 10887 true Chr10: 30509122-30520008 Eucalyptus grandis
Eucgr.J02538 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30519009-30520008 Eucalyptus grandis
Eucgr.J02538 1.0kb downstream 1.0kb downstream 10887 true Chr10: 30508122-30519008 Eucalyptus grandis
Eucgr.J02538 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30508122-30509121 Eucalyptus grandis
Eucgr.J02538 2.0kb upstream 2.0kb upstream 11887 true Chr10: 30509122-30521008 Eucalyptus grandis
Eucgr.J02538 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30519009-30521008 Eucalyptus grandis
Eucgr.J02538 2.0kb downstream 2.0kb downstream 11887 true Chr10: 30507122-30519008 Eucalyptus grandis
Eucgr.J02538 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30507122-30509121 Eucalyptus grandis
Eucgr.J02538 5.0kb upstream 5.0kb upstream 14887 true Chr10: 30509122-30524008 Eucalyptus grandis
Eucgr.J02538 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30519009-30524008 Eucalyptus grandis
Eucgr.J02538 5.0kb downstream 5.0kb downstream 14887 true Chr10: 30504122-30519008 Eucalyptus grandis
Eucgr.J02538 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30504122-30509121 Eucalyptus grandis
Eucgr.J02538 10.0kb upstream 10.0kb upstream 19887 true Chr10: 30509122-30529008 Eucalyptus grandis
Eucgr.J02538 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30519009-30529008 Eucalyptus grandis
Eucgr.J02538 10.0kb downstream 10.0kb downstream 19887 true Chr10: 30499122-30519008 Eucalyptus grandis
Eucgr.J02538 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30499122-30509121 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026337 5273 Angiosperm View MSA
124064440 5270 Rosid View MSA
123740384 5271 Pentapetalae View MSA
122793914 5272 Eudicot View MSA
121346649 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.59473 0.0 12.6093    
cufflinks 5.23332 0.0 11.7886    
cufflinks 4.95735 0.0 11.2159    
cufflinks 3.92533 0.0 8.98915   Low
cufflinks 5.72969 0.0 12.8666   High
cufflinks 4.73714 0.0 10.8276    

0 Strain