Gene : Eucgr.J02527 E. grandis v2.0
Defline:  (1 of 1) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  2146
Name:  ? Eucgr.J02527 Secondary Identifier:  ? PAC:32033785
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CYSTSYN-PWY Eucalyptus grandis pathologic  
Egrandis PWY-6936 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.J02527 0.5kb upstream 0.5kb upstream 6463 true Chr10: 30412145-30418607 Eucalyptus grandis
Eucgr.J02527 0.5kb upstream 0.5kb upstream 500 false Chr10: 30412145-30412644 Eucalyptus grandis
Eucgr.J02527 0.5kb downstream 0.5kb downstream 6463 true Chr10: 30412645-30419107 Eucalyptus grandis
Eucgr.J02527 0.5kb downstream 0.5kb downstream 500 false Chr10: 30418608-30419107 Eucalyptus grandis
Eucgr.J02527 1.0kb upstream 1.0kb upstream 6963 true Chr10: 30411645-30418607 Eucalyptus grandis
Eucgr.J02527 1.0kb upstream 1.0kb upstream 1000 false Chr10: 30411645-30412644 Eucalyptus grandis
Eucgr.J02527 1.0kb downstream 1.0kb downstream 6963 true Chr10: 30412645-30419607 Eucalyptus grandis
Eucgr.J02527 1.0kb downstream 1.0kb downstream 1000 false Chr10: 30418608-30419607 Eucalyptus grandis
Eucgr.J02527 2.0kb upstream 2.0kb upstream 7963 true Chr10: 30410645-30418607 Eucalyptus grandis
Eucgr.J02527 2.0kb upstream 2.0kb upstream 2000 false Chr10: 30410645-30412644 Eucalyptus grandis
Eucgr.J02527 2.0kb downstream 2.0kb downstream 7963 true Chr10: 30412645-30420607 Eucalyptus grandis
Eucgr.J02527 2.0kb downstream 2.0kb downstream 2000 false Chr10: 30418608-30420607 Eucalyptus grandis
Eucgr.J02527 5.0kb upstream 5.0kb upstream 10963 true Chr10: 30407645-30418607 Eucalyptus grandis
Eucgr.J02527 5.0kb upstream 5.0kb upstream 5000 false Chr10: 30407645-30412644 Eucalyptus grandis
Eucgr.J02527 5.0kb downstream 5.0kb downstream 10963 true Chr10: 30412645-30423607 Eucalyptus grandis
Eucgr.J02527 5.0kb downstream 5.0kb downstream 5000 false Chr10: 30418608-30423607 Eucalyptus grandis
Eucgr.J02527 10.0kb upstream 10.0kb upstream 15963 true Chr10: 30402645-30418607 Eucalyptus grandis
Eucgr.J02527 10.0kb upstream 10.0kb upstream 10000 false Chr10: 30402645-30412644 Eucalyptus grandis
Eucgr.J02527 10.0kb downstream 10.0kb downstream 15963 true Chr10: 30412645-30428607 Eucalyptus grandis
Eucgr.J02527 10.0kb downstream 10.0kb downstream 10000 false Chr10: 30418608-30428607 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96068 0.0 5.25035    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.43408 0.0 3.95882    
cufflinks 0.109878 0.0 0.41399 Low Low
cufflinks 0.251056 0.0 0.849915 Low  
cufflinks 3.40215 0.0 8.63092   High

0 Strain